RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 KLF1Q13351 362 aaPredicted RBP23.23■■□□□ 1.31
UBE3C-209ENST00000611269 MGAT5BQ3V5L5 792 aa23.23■■□□□ 1.31
UBE3C-209ENST00000611269 TMEM110Q86TL2 294 aa23.23■■□□□ 1.31
UBE3C-209ENST00000611269 IPO4Q8TEX9 1081 aaKnown RBP23.23■■□□□ 1.31
UBE3C-209ENST00000611269 GDPD5Q8WTR4 605 aa23.23■■□□□ 1.31
UBE3C-209ENST00000611269 HSFY1Q96LI6 401 aa23.23■■□□□ 1.31
UBE3C-209ENST00000611269 KLHL5Q96PQ7 755 aa23.23■■□□□ 1.31
UBE3C-209ENST00000611269 SEPT5Q99719 369 aaPredicted RBP23.23■■□□□ 1.31
UBE3C-209ENST00000611269 HHLA1C9JL84 531 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 GOLGA8KD6RF30 607 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 KRT3P12035 628 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 ATF2P15336 505 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 RPL34P49207 117 aaKnown RBP23.22■■□□□ 1.31
UBE3C-209ENST00000611269 GPR15P49685 360 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 DDR2Q16832 855 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 GPRIN1Q7Z2K8 1008 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 RUFY1Q96T51 708 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 HERPUD2Q9BSE4 406 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 EMILIN2Q9BXX0 1053 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 TRIM31Q9BZY9 425 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 PSD3Q9NYI0 1048 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 ATG2AQ2TAZ0 1938 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 ADH1AP07327 375 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 HAPLN1P10915 354 aaPredicted RBP23.22■■□□□ 1.31
UBE3C-209ENST00000611269 RALAP11233 206 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 LCP1P13796 627 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 CETN2P41208 172 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 SSR1P43307 286 aaKnown RBP23.22■■□□□ 1.31
UBE3C-209ENST00000611269 GYS2P54840 703 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 XYLT1Q86Y38 959 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 GOLGA6L1Q8N7Z2 621 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 KCTD13Q8WZ19 329 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 RBM41Q96IZ5 413 aaKnown RBP23.22■■□□□ 1.31
UBE3C-209ENST00000611269 OSBPL8Q9BZF1 889 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 FEZ2Q9UHY8 353 aaPredicted RBP23.22■■□□□ 1.31
UBE3C-209ENST00000611269 COLQQ9Y215 455 aaPredicted RBP23.22■■□□□ 1.31
UBE3C-209ENST00000611269 SNX24Q9Y343 169 aa23.22■■□□□ 1.31
UBE3C-209ENST00000611269 PLXNA3P51805 1871 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 MYO9BQ13459 2157 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 TRIM66O15016 1216 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 LPXNO60711 386 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 SEC24AO95486 1093 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 RFC1P35251 1148 aaPredicted RBP23.21■■□□□ 1.31
UBE3C-209ENST00000611269 ADIGQ0VDE8 80 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 MTMR3Q13615 1198 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 SPDYCQ5MJ68 293 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 SDHAF4Q5VUM1 108 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 LRIG3Q6UXM1 1119 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 SYDE1Q6ZW31 735 aaPredicted RBP23.21■■□□□ 1.31
UBE3C-209ENST00000611269 CCDC50Q8IVM0 306 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 C1orf54Q8WWF1 131 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 FAM129AQ9BZQ8 928 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 DCLK3Q9C098 648 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 CYLDQ9NQC7 956 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 GRHL1Q9NZI5 618 aa23.21■■□□□ 1.31
UBE3C-209ENST00000611269 COL4A4P53420 1690 aaPredicted RBP23.2■■□□□ 1.31
UBE3C-209ENST00000611269 TGM5O43548 720 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 ECEL1O95672 775 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 KLRC2P26717 231 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 FLT3P36888 993 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 HSD17B3P37058 310 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 ACADSBP45954 432 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 KCNJ1P48048 391 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 COPS2P61201 443 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 CCNG2Q16589 344 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 ZDHHC24Q6UX98 284 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 TMC3Q7Z5M5 1100 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 SCUBE3Q8IX30 993 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 MCRS1Q96EZ8 462 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 C8orf48Q96LL4 319 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 FMO2Q99518 471 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 TXLNGYQ9BZA5 131 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 MIS12Q9H081 205 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 CYP4F11Q9HBI6 524 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 LRRC4Q9HBW1 653 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 PNPLA8Q9NP80 782 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 DDX56Q9NY93 547 aaKnown RBP23.2■■□□□ 1.3
UBE3C-209ENST00000611269 TRIOBPQ9H2D6 2365 aa23.2■■□□□ 1.3
UBE3C-209ENST00000611269 SPATA31D3P0C874 917 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 SNX16P57768 344 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 LRIT3Q3SXY7 679 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 RAB41Q5JT25 222 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 PDE12Q6L8Q7 609 aaKnown RBP23.19■■□□□ 1.3
UBE3C-209ENST00000611269 SPATA31D4Q6ZUB0 917 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 FAM183BPQ6ZVS7 135 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 STKLD1Q8NE28 680 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 A0A1W2PPC1 479 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 GOLGA8SH3BPF8 625 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 RFXAPO00287 272 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 PAPSS1O43252 624 aaPredicted RBP23.19■■□□□ 1.3
UBE3C-209ENST00000611269 PPFIA2O75334 1257 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 RPL21P46778 160 aaKnown RBP23.19■■□□□ 1.3
UBE3C-209ENST00000611269 TKTL1P51854 596 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 DMTNQ08495 405 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 LLGL1Q15334 1064 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 KCTD19Q17RG1 926 aaPredicted RBP23.19■■□□□ 1.3
UBE3C-209ENST00000611269 OR6B2Q6IFH4 312 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 POLNQ7Z5Q5 900 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 JOSD2Q8TAC2 188 aa23.19■■□□□ 1.3
UBE3C-209ENST00000611269 GPR152Q8TDT2 470 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms