RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-234	ENST00000584525	TAS1R2	Q8TE23	839 aa		13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	GTPBP2	Q9BX10	602 aa	Known RBP	13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	GZF1	Q9H116	711 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SMYD3	Q9H7B4	428 aa		13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	VRTN	Q9H8Y1	702 aa		13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	FSCN3	Q9NQT6	498 aa		13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	RAB20	Q9NX57	234 aa		13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	TBC1D14	Q9P2M4	693 aa		13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ZZEF1	O43149	2961 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SRRM3	A6NNA2	597 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	PES1	O00541	588 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	VNN1	O95497	513 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ASS1	P00966	412 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	TPM2	P07951	284 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	PTPN1	P18031	435 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CD58	P19256	250 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ITPKA	P23677	461 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	YWHAQ	P27348	245 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CACNA2D1	P54289	1103 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	RPL6	Q02878	288 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	GAD2	Q05329	585 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SPOPL	Q6IQ16	392 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SLC23A3	Q6PIS1	610 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	DUSP9	Q99956	384 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ZNF518B	Q9C0D4	1074 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ELOVL4	Q9GZR5	314 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	NIF3L1	Q9GZT8	377 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	XYLT2	Q9H1B5	865 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ANO10	Q9NW15	660 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	PILRB	Q9UKJ0	227 aa		13.85	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	E2F8	A0AVK6	867 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CLDN5	O00501	218 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ZBTB24	O43167	697 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	AP5Z1	O43299	807 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	AFP	P02771	609 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CHRM1	P11229	460 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ERCC5	P28715	1186 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	RDX	P35241	583 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	FMO5	P49326	533 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CDH8	P55286	799 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	GFPT1	Q06210	699 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	STX1A	Q16623	288 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	DPCR1	Q3MIW9	517 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	PREPL	Q4J6C6	727 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	TRMT11	Q7Z4G4	463 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	NUP93	Q8N1F7	819 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	ANKRD20A12P	Q8NF67	263 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CEP76	Q8TAP6	659 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	FBXO32	Q969P5	355 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	B3GNT5	Q9BYG0	378 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	DPEP3	Q9H4B8	488 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CYP3A43	Q9HB55	503 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	DEC1	Q9P2X7	70 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SLC6A14	Q9UN76	642 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SH3BP1	Q9Y3L3	701 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	NEUROG3	Q9Y4Z2	214 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	NME7	Q9Y5B8	376 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	IGF2R	P11717	2491 aa		13.84	□□□□□ -0.19
CDK5RAP3-234	ENST00000584525	SPEG	Q15772	3267 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	COCH	O43405	550 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	RTN3	O95197	1032 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	HOXB3	P14651	431 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	HOXD12	P35452	270 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	WAS	P42768	502 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	SEMA3B	Q13214	749 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	DUOXA1	Q1HG43	343 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	ANO4	Q32M45	955 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	C1orf220	Q5T0J3	134 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	C10orf76	Q5T2E6	689 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	HECTD3	Q5T447	861 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	CAVIN1	Q6NZI2	390 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	SLC36A4	Q6YBV0	504 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	NUDT18	Q6ZVK8	323 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	PIP4P1	Q86T03	277 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	B3GALNT2	Q8NCR0	500 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	PDZD8	Q8NEN9	1154 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	KCNV2	Q8TDN2	545 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	ELMO3	Q96BJ8	720 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	OTUB2	Q96DC9	234 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	NT5C1B	Q96P26	610 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	NACA2	Q9H009	215 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	TMEM30A	Q9NV96	361 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	KLK13	Q9UKR3	277 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	MSRB2	Q9Y3D2	182 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	FAM208B	Q5VWN6	2430 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	ATRX	P46100	2492 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	ATG2B	Q96BY7	2078 aa		13.83	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	UPK3BL1	B0FP48	263 aa		13.82	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	UPK3BL2	E5RIL1	263 aa		13.82	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	P4HA2	O15460	535 aa		13.82	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	OPHN1	O60890	802 aa		13.82	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	TULP3	O75386	442 aa		13.82	□□□□□ -0.2
CDK5RAP3-234	ENST00000584525	SERPINF2	P08697	491 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms