RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ETFBKMTQ8IXQ9 262 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 CAMKK1Q8N5S9 505 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 ENOX1Q8TC92 643 aaKnown RBP15.56■□□□□ 0.08
SS18-212ENST00000579061 IRGQQ8WZA9 623 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 SHC3Q92529 594 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 SECISBP2LQ93073 1101 aaKnown RBP15.56■□□□□ 0.08
SS18-212ENST00000579061 EPC1Q9H2F5 836 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 NDST4Q9H3R1 872 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 ABCC13Q9NSE7 274 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 C2orf42Q9NWW7 574 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 MARK1Q9P0L2 795 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 MARCH2Q9P0N8 246 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 STRIP2Q9ULQ0 834 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 SLC8A2Q9UPR5 921 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 K7EQS6 105 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 FBXO21O94952 628 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 EEF1GP26641 437 aaKnown RBP15.55■□□□□ 0.08
SS18-212ENST00000579061 GRIA2P42262 883 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 GPD2P43304 727 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 TNFRSF4P43489 277 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 RPL34P49207 117 aaKnown RBP15.55■□□□□ 0.08
SS18-212ENST00000579061 MRPS21P82921 87 aaKnown RBP15.55■□□□□ 0.08
SS18-212ENST00000579061 HSF5Q4G112 596 aaPredicted RBP15.55■□□□□ 0.08
SS18-212ENST00000579061 MIIPQ5JXC2 388 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 BSPRYQ5W0U4 402 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 WDR5BQ86VZ2 330 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 TMEM25Q86YD3 366 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 MIB1Q86YT6 1006 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 RPLP0P6Q8NHW5 317 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 USP33Q8TEY7 942 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 STK32AQ8WU08 396 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 WDR35Q9P2L0 1181 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 RASAL2Q9UJF2 1139 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 GVINP1Q7Z2Y8 2422 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 SPAG17Q6Q759 2223 aa15.55■□□□□ 0.08
SS18-212ENST00000579061 YJEFN3A6XGL0 299 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 KCNJ18B7U540 433 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 E7ENQ6 273 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 GABBR2O75899 941 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 KAT7O95251 611 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 LCP1P13796 627 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 CHKAP35790 457 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 ACADSBP45954 432 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 SLC6A11P48066 632 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 FNTBP49356 437 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 RGS7P49802 495 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 KCNJ12Q14500 433 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 ANO4Q32M45 955 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 TCP11X2Q5H9J9 407 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 MSANTD2Q6P1R3 559 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 GJB7Q6PEY0 223 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 NUDT18Q6ZVK8 323 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 C12orf40Q86WS4 652 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 PHTF2Q8N3S3 785 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 RNF139Q8WU17 664 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 ZNF606Q8WXB4 792 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 NDRG1Q92597 394 aaKnown RBP15.54■□□□□ 0.08
SS18-212ENST00000579061 PLD4Q96BZ4 506 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 XPO6Q96QU8 1125 aaKnown RBP15.54■□□□□ 0.08
SS18-212ENST00000579061 SIX2Q9NPC8 291 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 ARHGEF4Q9NR80 690 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 DEC1Q9P2X7 70 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 HBS1LQ9Y450 684 aaKnown RBP15.54■□□□□ 0.08
SS18-212ENST00000579061 NFE2L3Q9Y4A8 694 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 WDR87Q6ZQQ6 2873 aa15.54■□□□□ 0.08
SS18-212ENST00000579061 EML5Q05BV3 1969 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 GPR179Q6PRD1 2367 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 SLC12A8A0AV02 714 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 BECN2A8MW95 431 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 SART1O43290 800 aaKnown RBP15.53■□□□□ 0.08
SS18-212ENST00000579061 CACNG3O60359 315 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 TULP3O75386 442 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 LETM1O95202 739 aaPredicted RBP15.53■□□□□ 0.08
SS18-212ENST00000579061 CALCAP01258 141 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 KLKB1P03952 638 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 GNA15P30679 374 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 ARHGAP44Q17R89 818 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 SASS6Q6UVJ0 657 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 KCNV2Q8TDN2 545 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 RUBCNQ92622 972 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 SAMSN1Q9NSI8 373 aaKnown RBP15.53■□□□□ 0.08
SS18-212ENST00000579061 ANO10Q9NW15 660 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 DNAJC12Q9UKB3 198 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 SMG5Q9UPR3 1016 aaKnown RBP15.53■□□□□ 0.08
SS18-212ENST00000579061 ZNF292O60281 2723 aa15.53■□□□□ 0.08
SS18-212ENST00000579061 CFAP54Q96N23 3096 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 THAP12O43422 761 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 LTFP02788 710 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 TYRP14679 529 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 CORO1AP31146 461 aaKnown RBP15.52■□□□□ 0.08
SS18-212ENST00000579061 APBA1Q02410 837 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 DMWDQ09019 674 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 DMC1Q14565 340 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 TRIP4Q15650 581 aaPredicted RBP15.52■□□□□ 0.08
SS18-212ENST00000579061 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 CCDC183Q5T5S1 534 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 FMNL3Q8IVF7 1028 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 CPXM2Q8N436 756 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 NAT16Q8N8M0 369 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 TERB1Q8NA31 727 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms