RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CNKSR3Q6P9H4 555 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 SPATA2LQ8IUW3 424 aaPredicted RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 TRIM43Q96BQ3 446 aaPredicted RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 TBCBQ99426 244 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 COLEC11Q9BWP8 271 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 DCLK3Q9C098 648 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 MICAL3Q7RTP6 2002 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 HHLA1C9JL84 531 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 GALTP07902 379 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 CSF2RAP15509 400 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 CYP2F1P24903 491 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 PMS2P54278 862 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 YWHAZP63104 245 aaKnown RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 PITX1P78337 314 aaPredicted RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 PGM2Q96G03 612 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 MRPL9Q9BYD2 267 aaKnown RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 LRRC19Q9H756 370 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 ABI2Q9NYB9 513 aaPredicted RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 YJEFN3A6XGL0 299 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 E7ENQ6 273 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 OAZ2O95190 189 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 DESP17661 470 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 SCNN1AP37088 669 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 ARPP19P56211 112 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 IFRD2Q12894 506 aaPredicted RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 ZC3H12AQ5D1E8 599 aaKnown RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 C12orf50Q8NA57 414 aaPredicted RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 BCL7CQ8WUZ0 217 aaPredicted RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 CCDC114Q96M63 670 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 PGLYRP2Q96PD5 576 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 DDX23Q9BUQ8 820 aaKnown RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 CSNK1G1Q9HCP0 422 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 DMAP1Q9NPF5 467 aaPredicted RBP21.09■□□□□ 0.97
SMG8-203ENST00000578922 CAPN7Q9Y6W3 813 aa21.09■□□□□ 0.97
SMG8-203ENST00000578922 TJP3O95049 919 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 MATKP42679 507 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 PTPN9P43378 593 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 SULT1E1P49888 294 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 CDH6P55285 790 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 COPS2P61201 443 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 MMRN1Q13201 1228 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 MAPRE1Q15691 268 aaKnown RBP21.08■□□□□ 0.97
SMG8-203ENST00000578922 CTXN3Q4LDR2 81 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 SYPL2Q5VXT5 272 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 LRRC43Q8N309 656 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 TMEM106CQ9BVX2 250 aa21.08■□□□□ 0.97
SMG8-203ENST00000578922 SAE1Q9UBE0 346 aaPredicted RBP21.08■□□□□ 0.97
SMG8-203ENST00000578922 MTRF1LQ9UGC7 380 aaKnown RBP21.08■□□□□ 0.97
SMG8-203ENST00000578922 GRIK1P39086 918 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 CTCFP49711 727 aaPredicted RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 DAOAP59103 153 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 RAB41Q5JT25 222 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 DENND2CQ68D51 928 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 FUT10Q6P4F1 479 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 NECAB2Q7Z6G3 386 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 STKLD1Q8NE28 680 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 CMASQ8NFW8 434 aaPredicted RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 P3H4Q92791 437 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 ACTR5Q9H9F9 607 aaPredicted RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 NAALADL1Q9UQQ1 740 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 VWA8A3KMH1 1905 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 LAMA2P24043 3122 aaKnown RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 DAB1O75553 588 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 ACRP10323 421 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 CA9Q16790 459 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 ZDHHC24Q6UX98 284 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 TAS1R1Q7RTX1 841 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 SCN4BQ8IWT1 228 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 SCAMP5Q8TAC9 235 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 C11orf84Q9BUA3 381 aaPredicted RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 SNRNP25Q9BV90 132 aaKnown RBP21.07■□□□□ 0.96
SMG8-203ENST00000578922 TMEM109Q9BVC6 243 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 MAGEB5Q9BZ81 275 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 ZCWPW1Q9H0M4 648 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 EPB41L4BQ9H329 900 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 SNX24Q9Y343 169 aa21.07■□□□□ 0.96
SMG8-203ENST00000578922 SF3B1O75533 1304 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMG8-203ENST00000578922 H0YHG0 523 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 SYN3O14994 580 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 CST8O60676 142 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 ECEL1O95672 775 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 ZBED1O96006 694 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 RAG1P15918 1043 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 PLTPP55058 493 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 IFT88Q13099 833 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 KRT81Q14533 505 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 TRIP13Q15645 432 aaPredicted RBP21.06■□□□□ 0.96
SMG8-203ENST00000578922 RNF187Q5TA31 235 aaPredicted RBP21.06■□□□□ 0.96
SMG8-203ENST00000578922 SDHAF4Q5VUM1 108 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 C4orf50Q6ZRC1 276 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 RFX6Q8HWS3 928 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 ADAM32Q8TC27 787 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 CNGB3Q9NQW8 809 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 CAPN9O14815 690 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 FBXO21O94952 628 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 TIMP1P01033 207 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 HNRNPH1P31943 449 aaKnown RBP21.06■□□□□ 0.96
SMG8-203ENST00000578922 DEFB103AP81534 67 aa21.06■□□□□ 0.96
SMG8-203ENST00000578922 ACTN3Q08043 901 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms