RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.67■□□□□ 0.42
SREBF1-218ENST00000578469 LMCD1Q9NZU5 365 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 TSC2P49815 1807 aa17.67■□□□□ 0.42
SREBF1-218ENST00000578469 SF3B1O75533 1304 aaKnown RBP eCLIP17.67■□□□□ 0.422e-10■■■■■ 48.1
SREBF1-218ENST00000578469 OR6C75A6NL08 312 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 CAPN9O14815 690 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 MDM4O15151 490 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 SLC11A1P49279 550 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 NDUFV1P49821 464 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 SULT1E1P49888 294 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 CDH6P55285 790 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 HDAC4P56524 1084 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 WDR5P61964 334 aaKnown RBP17.66■□□□□ 0.42
SREBF1-218ENST00000578469 VARS2Q5ST30 1063 aaKnown RBP17.66■□□□□ 0.42
SREBF1-218ENST00000578469 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 ZNF280DQ6N043 979 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 BBS12Q6ZW61 710 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 ANKS1BQ7Z6G8 1248 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 LRRTM3Q86VH5 581 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 VSIG1Q86XK7 387 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 CRIPAKQ8N1N5 446 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 SCML4Q8N228 414 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 SLC2A13Q96QE2 648 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 PEBP4Q96S96 227 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 TMEM209Q96SK2 561 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 KCNK16Q96T55 309 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-218ENST00000578469 FAM129AQ9BZQ8 928 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 TRIM31Q9BZY9 425 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 TMLHEQ9NVH6 421 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 RRN3Q9NYV6 651 aa17.66■□□□□ 0.42
SREBF1-218ENST00000578469 R3HDM2Q9Y2K5 976 aaKnown RBP17.66■□□□□ 0.42
SREBF1-218ENST00000578469 BRWD1Q9NSI6 2320 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 HHLA1C9JL84 531 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 RRP9O43818 475 aaKnown RBP17.65■□□□□ 0.42
SREBF1-218ENST00000578469 CST8O60676 142 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 EFCAB14O75071 495 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 SASH3O75995 380 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 ENDOD1O94919 500 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 ARHGEF15O94989 841 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 ZBED1O96006 694 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 KRT17Q04695 432 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 PTK6Q13882 451 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 CTXN3Q4LDR2 81 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 DCAF6Q58WW2 860 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 ERMARDQ5T6L9 678 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 DDX42Q86XP3 938 aaKnown RBP eCLIP17.65■□□□□ 0.42
SREBF1-218ENST00000578469 CCHCR1Q8TD31 782 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-218ENST00000578469 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 LRRC45Q96CN5 670 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 FUBP3Q96I24 572 aaKnown RBP eCLIP17.65■□□□□ 0.42
SREBF1-218ENST00000578469 OXCT2Q9BYC2 517 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-218ENST00000578469 DRG1Q9Y295 367 aaKnown RBP17.65■□□□□ 0.42
SREBF1-218ENST00000578469 SNX24Q9Y343 169 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 PIEZO1Q92508 2521 aa17.65■□□□□ 0.42
SREBF1-218ENST00000578469 ABHD14A-ACY1A0A1B0GW23 586 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 ZNF487B1APH4 448 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 H7C4K7 107 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 LIASO43766 372 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 GPR37L1O60883 481 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 GALTP07902 379 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 FGFR3P22607 806 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 GRIK1P39086 918 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 ARSEP51690 589 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 CACNA2D1P54289 1103 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 BCAR1P56945 870 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 CALCOCO2Q13137 446 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 BYSLQ13895 437 aaKnown RBP17.64■□□□□ 0.41
SREBF1-218ENST00000578469 TRADDQ15628 312 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 SLC39A12Q504Y0 691 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 FUT10Q6P4F1 479 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 CYP4V2Q6ZWL3 525 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-218ENST00000578469 GSTA5Q7RTV2 222 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 PSTKQ8IV42 348 aaKnown RBP17.64■□□□□ 0.41
SREBF1-218ENST00000578469 KRT222Q8N1A0 295 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 TET1Q8NFU7 2136 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 NDRG1Q92597 394 aaKnown RBP17.64■□□□□ 0.41
SREBF1-218ENST00000578469 GDAP1L1Q96MZ0 367 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 NPY6RQ99463 290 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 SNRNP25Q9BV90 132 aaKnown RBP17.64■□□□□ 0.41
SREBF1-218ENST00000578469 FAM53CQ9NYF3 392 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 MTRF1LQ9UGC7 380 aaKnown RBP17.64■□□□□ 0.41
SREBF1-218ENST00000578469 ASIC3Q9UHC3 531 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 ZNF148Q9UQR1 794 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 PCDHB5Q9Y5E4 795 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 TTC3P53804 2025 aa17.64■□□□□ 0.41
SREBF1-218ENST00000578469 LPXNO60711 386 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 UPP2O95045 317 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 LTFP02788 710 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 AMHP03971 560 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 USP17L7P0C7H9 530 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 RDXP35241 583 aaKnown RBP17.63■□□□□ 0.41
SREBF1-218ENST00000578469 CDR1P51861 262 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 VCPP55072 806 aaKnown RBP17.63■□□□□ 0.41
SREBF1-218ENST00000578469 DYNLT1P63172 113 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 DEUP1Q05D60 604 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 DPYSL3Q14195 570 aa17.63■□□□□ 0.41
SREBF1-218ENST00000578469 MRPL58Q14197 206 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms