RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 TXNL4AP83876 142 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 LMAN2Q12907 356 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 MTAPQ13126 283 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 PTK2BQ14289 1009 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 KCNJ12Q14500 433 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 SPARCL1Q14515 664 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 PUM3Q15397 648 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 SMN1Q16637 294 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 TRIM71Q2Q1W2 868 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 C4orf46Q504U0 113 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 RNASE12Q5GAN4 147 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 C10orf62Q5T681 223 aaPredicted RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 FCRLBQ6BAA4 426 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 KIRREL2Q6UWL6 708 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 GATAD2AQ86YP4 633 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 RASGRP3Q8IV61 690 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 P3H2Q8IVL5 708 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 CLASRPQ8N2M8 674 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 TERB1Q8NA31 727 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 IPO4Q8TEX9 1081 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 OVCA2Q8WZ82 227 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 FYTTD1Q96QD9 318 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 MMS19Q96T76 1030 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 PRPF18Q99633 342 aaKnown RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 CINPQ9BW66 212 aaPredicted RBP2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 R3HDMLQ9H3Y0 253 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 PRDM13Q9H4Q3 707 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 RXFP3Q9NSD7 469 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 SH3BP4Q9P0V3 963 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 IGSF9Q9P2J2 1179 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 LPAR3Q9UBY5 353 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 COX11Q9Y6N1 276 aa2.59□□□□□ -1.99
PTP4A1-204ENST00000578299 PNMA6EA0A0J9YXQ4 647 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 LRRC3CA6NJW4 275 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 BTBD19C9JJ37 291 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 SYT5O00445 386 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 PCDH17O14917 1159 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 NPC1O15118 1278 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 SUV39H1O43463 412 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 MT-CO3P00414 261 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 C1RP00736 705 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 ITGA5P08648 1049 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 APEHP13798 732 aaKnown RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 DRD1P21728 446 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 MMP8P22894 467 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 PBX1P40424 430 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 GSTM5P46439 218 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 RENBPP51606 427 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 COPB1P53618 953 aaKnown RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 ALDH18A1P54886 795 aaKnown RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 POLE2P56282 527 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 NHLH1Q02575 133 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 CFHR3Q02985 330 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 DEUP1Q05D60 604 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 CCDC15Q0P6D6 951 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 SEMA3BQ13214 749 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 DNASE1L3Q13609 305 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 BLMHQ13867 455 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 CSHL1Q14406 222 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 PFKFB4Q16877 469 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 ZACNQ401N2 412 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 AASDHQ4L235 1098 aaPredicted RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 TMEM196Q5HYL7 178 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 FAM90A2PQ658T7 463 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 GRHL2Q6ISB3 625 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 GGT6Q6P531 493 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 SERPINA13PQ6UXR4 307 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 RD3Q7Z3Z2 195 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 BCDIN3DQ7Z5W3 292 aaKnown RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 NRSN1Q8IZ57 195 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 LINC01465Q8N7H1 131 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 C12orf76Q8N812 135 aaPredicted RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 FAM71DQ8N9W8 422 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 FAM71BQ8TC56 605 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 WDR60Q8WVS4 1066 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 RSC1A1Q92681 617 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 EID2BQ96D98 161 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 CCDC17Q96LX7 622 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 MACROD1Q9BQ69 325 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 OBP2BQ9NPH6 170 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 GAR1Q9NY12 217 aaKnown RBP2.58□□□□□ -2
PTP4A1-204ENST00000578299 SERGEFQ9UGK8 458 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 SPATA31A6Q5VVP1 1343 aa2.58□□□□□ -2
PTP4A1-204ENST00000578299 FER1L4A9Z1Z3 1794 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 AQP12BA6NM10 295 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 LGALS16A8MUM7 142 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 POC1B-GALNT4F8VUJ3 575 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 UBE2Q2LH0YL09 131 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 H3BNC9 293 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 J3KTA2 159 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 SMIM22K7EJ46 135 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 DHHO43323 396 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 CA12O43570 354 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 ASNA1O43681 348 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 PPFIA2O75334 1257 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 GCATO75600 419 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 CSTBP04080 98 aaKnown RBP2.57□□□□□ -2
PTP4A1-204ENST00000578299 ANXA6P08133 673 aa2.57□□□□□ -2
PTP4A1-204ENST00000578299 CHRM5P08912 532 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms