RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 BSPRYQ5W0U4 402 aa27.66■■■□□ 2.02
PPP4R1-204ENST00000577393 ZC3H14Q6PJT7 736 aaKnown RBP27.66■■■□□ 2.02
PPP4R1-204ENST00000577393 C12orf40Q86WS4 652 aa27.66■■■□□ 2.02
PPP4R1-204ENST00000577393 TMEM25Q86YD3 366 aa27.66■■■□□ 2.02
PPP4R1-204ENST00000577393 NELL1Q92832 810 aa27.66■■■□□ 2.02
PPP4R1-204ENST00000577393 STRIP2Q9ULQ0 834 aa27.66■■■□□ 2.02
PPP4R1-204ENST00000577393 MYO15AQ9UKN7 3530 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 HMBSP08397 361 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 KRT31Q15323 416 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 MEA1Q16626 185 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 Q6ZNB5 142 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 EDEM1Q92611 657 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 NKD2Q969F2 451 aaPredicted RBP27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 VPS16Q9H269 839 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 ZSCAN32Q9NX65 697 aa27.65■■■□□ 2.02
PPP4R1-204ENST00000577393 FANCMQ8IYD8 2048 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 SLC12A8A0AV02 714 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 FOXN3O00409 490 aaPredicted RBP27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 PAPSS2O95340 614 aaPredicted RBP27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 MYL5Q02045 173 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 TYRO3Q06418 890 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 KLHDC7AQ5VTJ3 777 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 SMYD5Q6GMV2 418 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 CLEC4CQ8WTT0 213 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 IRGQQ8WZA9 623 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 FAM126AQ9BYI3 521 aaPredicted RBP27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 ST7Q9NRC1 585 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 ABCC13Q9NSE7 274 aa27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 OLA1Q9NTK5 396 aaKnown RBP27.64■■■□□ 2.02
PPP4R1-204ENST00000577393 HOXC11O43248 304 aaPredicted RBP27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 GFRA3O60609 400 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 ATG13O75143 517 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 FBXO21O94952 628 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 KLKB1P03952 638 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 EIF2DP41214 584 aaKnown RBP27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 RPL34P49207 117 aaKnown RBP27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 ANO4Q32M45 955 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 ASCL5Q7RTU5 278 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 ZBTB44Q8NCP5 570 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 RNF139Q8WU17 664 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 PNKPQ96T60 521 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 LSM14BQ9BX40 385 aaKnown RBP27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 MIS12Q9H081 205 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 PCDHGA2Q9Y5H1 932 aa27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 ZFHX2Q9C0A1 2572 aaPredicted RBP27.63■■■□□ 2.01
PPP4R1-204ENST00000577393 PRR23AA6NEV1 266 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 CHURC1-FNTBB4DL54 471 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 K7EQS6 105 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 K7ESF4 209 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 PNMA6AP0CW24 399 aaPredicted RBP27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 PTK2Q05397 1052 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 MESP2Q0VG99 397 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 CAVIN1Q6NZI2 390 aaKnown RBP27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 ETFBKMTQ8IXQ9 262 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 NAT16Q8N8M0 369 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 STK32AQ8WU08 396 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 ATRIPQ8WXE1 791 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 DCLK3Q9C098 648 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 SEMA4AQ9H3S1 761 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 SFMBT1Q9UHJ3 866 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 CYTH4Q9UIA0 394 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 ZNF510Q9Y2H8 683 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 FHOD1Q9Y613 1164 aa27.62■■■□□ 2.01
PPP4R1-204ENST00000577393 TPM2P07951 284 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 CORO1AP31146 461 aaKnown RBP27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 CLCN1P35523 988 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 ACADSBP45954 432 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 NRLP54845 237 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 RAPGEF1Q13905 1077 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 DRAP1Q14919 205 aaPredicted RBP27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 TPGS1Q6ZTW0 290 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 FMNL3Q8IVF7 1028 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 SCUBE3Q8IX30 993 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 RPLP0P6Q8NHW5 317 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 SLC4A5Q9BY07 1137 aa27.61■■■□□ 2.01
PPP4R1-204ENST00000577393 DMDP11532 3685 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 USP34Q70CQ2 3546 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 KAT7O95251 611 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 LTFP02788 710 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 APODP05090 189 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 HOXC13P31276 330 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 NCAPHQ15003 741 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 SFTPA1Q8IWL2 248 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 FAM71AQ8IYT1 594 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 NAA15Q9BXJ9 866 aaKnown RBP27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 ARHGEF4Q9NR80 690 aa27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 POLR3BQ9NW08 1133 aaPredicted RBP27.6■■■□□ 2.01
PPP4R1-204ENST00000577393 ANTXRLA6NF34 631 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 NEDD8-MDP1E9PL57 170 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 LILRB5O75023 590 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 TULP3O75386 442 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 UCHL3P15374 230 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 SEC13P55735 322 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 KDSRQ06136 332 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 DMWDQ09019 674 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 TRIP4Q15650 581 aaPredicted RBP27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 SLC47A2Q86VL8 602 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 DENND1CQ8IV53 801 aa27.59■■■□□ 2.01
PPP4R1-204ENST00000577393 PHTF2Q8N3S3 785 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms