RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RALGDSQ12967 914 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CHAF1BQ13112 559 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 GPS2Q13227 327 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ACVR2BQ13705 512 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 MPP2Q14168 576 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 NFE2L1Q14494 772 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 LASP1Q14847 261 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 ARID5BQ14865 1188 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 MORF4L2Q15014 288 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 RBBP5Q15291 538 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 TLR1Q15399 786 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TRADDQ15628 312 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ZACNQ401N2 412 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 FUT11Q495W5 492 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 AARDQ4LEZ3 155 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 USP39Q53GS9 565 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 ZBTB41Q5SVQ8 909 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 RNF220Q5VTB9 566 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 GPAT2Q6NUI2 795 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TXNDC11Q6PKC3 985 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 VHLLQ6RSH7 139 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 MEX3BQ6ZN04 569 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 GK5Q6ZS86 529 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 KCNK18Q7Z418 384 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ZBTB33Q86T24 672 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 SESTD1Q86VW0 696 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 FBXO11Q86XK2 927 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ETFBKMTQ8IXQ9 262 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TNS4Q8IZW8 715 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 VWA5B2Q8N398 1253 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 C17orf53Q8N3J3 647 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 HDDC3Q8N4P3 179 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 DPP10Q8N608 796 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 KCTD6Q8NC69 237 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 C3orf58Q8NDZ4 430 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CEP70Q8NHQ1 597 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CYP2W1Q8TAV3 490 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CCDC110Q8TBZ0 833 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CCDC12Q8WUD4 166 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 HAS1Q92839 578 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CUL5Q93034 780 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 C19orf60Q96EN9 201 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 DACH2Q96NX9 599 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 NOX5Q96PH1 765 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PNMA5Q96PV4 448 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ARHGAP9Q9BRR9 750 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 KIFC3Q9BVG8 833 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 SERHL2Q9H4I8 314 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 MMRN2Q9H8L6 949 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PSTPIP2Q9H939 334 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 COPS7BQ9H9Q2 264 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 C17orf75Q9HAS0 396 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 HPS4Q9NQG7 708 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 SERINC1Q9NRX5 453 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 SNTG1Q9NSN8 517 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 COL20A1Q9P218 1284 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 VPS18Q9P253 973 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 MAP10Q9P2G4 905 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 NDOR1Q9UHB4 597 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 FAM153AQ9UHL3 310 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ATPIF1Q9UII2 106 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PCOLCE2Q9UKZ9 415 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PNMA3Q9UL41 463 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PCDHGB4Q9UN71 923 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 AURKCQ9UQB9 309 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 GDAQ9Y2T3 454 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PCDHGB2Q9Y5G2 931 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CAPN7Q9Y6W3 813 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 A0A0U1RQK1 487 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 RNF103-CHMP3A0A140T963 221 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ZNF320A2RRD8 509 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 TRIM49BA6NDI0 452 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ZSCAN5CA6NGD5 496 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 TMEM229AB2RXF0 380 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 FAM86B1E9PN63 330 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 GOLGA8SH3BPF8 625 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 STMND1H3BQB6 276 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 GTPBP1O00178 669 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 RNF103O00237 685 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 TAF4O00268 1085 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 VWA5AO00534 786 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 NFIBO00712 420 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 NPC1O15118 1278 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 KPNA5O15131 536 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PGRMC2O15173 223 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 CTIFO43310 598 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 SMAD6O43541 496 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 KLRC4O43908 158 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 EXTL3O43909 919 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PCDHGA12O60330 932 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 TSPAN9O75954 239 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 FKBP9O95302 570 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 PNPP00491 289 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 MYCP01106 439 aaPredicted RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 THP07101 528 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 ASNSP08243 561 aa3.71□□□□□ -1.82
SMG6-208ENST00000570874 LTA4HP09960 611 aaKnown RBP3.71□□□□□ -1.82
SMG6-208ENST00000570874 FAM86B2P0C5J1 330 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms