RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 LCP1P13796 627 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
CNOT1-220ENST00000569916 GNA15P30679 374 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 HOXC13P31276 330 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 GPD2P43304 727 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 SLC6A11P48066 632 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 GAD2Q05329 585 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 MESP2Q0VG99 397 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 MEA1Q16626 185 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 CDKAL1Q5VV42 579 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 SASS6Q6UVJ0 657 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 RSRC2Q7L4I2 434 aaKnown RBP13.66□□□□□ -0.22
CNOT1-220ENST00000569916 ETFBKMTQ8IXQ9 262 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 RPLP0P6Q8NHW5 317 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 ZNF606Q8WXB4 792 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 ANTXRLA6NF34 631 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 K7EQS6 105 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 PIK3R2O00459 728 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 THAP12O43422 761 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 MED7O43513 233 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
CNOT1-220ENST00000569916 KLKB1P03952 638 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
CNOT1-220ENST00000569916 RPL34P49207 117 aaKnown RBP13.65□□□□□ -0.22
CNOT1-220ENST00000569916 NRLP54845 237 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 COG7P83436 770 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 KDSRQ06136 332 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 DMWDQ09019 674 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 STX1AQ16623 288 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 BSPRYQ5W0U4 402 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 BTBD8Q5XKL5 378 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 SMYD5Q6GMV2 418 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 DENND1BQ6P3S1 775 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 TMEM25Q86YD3 366 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 SFTPA1Q8IWL2 248 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 CLEC4CQ8WTT0 213 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 ATRIPQ8WXE1 791 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 PNKPQ96T60 521 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 OLA1Q9NTK5 396 aaKnown RBP13.65□□□□□ -0.22
CNOT1-220ENST00000569916 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 TAB2Q9NYJ8 693 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 MARK1Q9P0L2 795 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 STRIP2Q9ULQ0 834 aa13.65□□□□□ -0.22
CNOT1-220ENST00000569916 SLC12A8A0AV02 714 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.64□□□□□ -0.23
CNOT1-220ENST00000569916 ATG13O75143 517 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 FBXO21O94952 628 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 KAT7O95251 611 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 LMNAP02545 664 aaKnown RBP13.64□□□□□ -0.23
CNOT1-220ENST00000569916 HMBSP08397 361 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 PNMA6AP0CW24 399 aaPredicted RBP13.64□□□□□ -0.23
CNOT1-220ENST00000569916 CORO1AP31146 461 aaKnown RBP13.64□□□□□ -0.23
CNOT1-220ENST00000569916 HOXA6P31267 233 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 USP8P40818 1118 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 ANO4Q32M45 955 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 SUMF1Q8NBK3 374 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 USP33Q8TEY7 942 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 EDEM1Q92611 657 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 ARHGEF4Q9NR80 690 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 ABCC13Q9NSE7 274 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 POLR3BQ9NW08 1133 aaPredicted RBP13.64□□□□□ -0.23
CNOT1-220ENST00000569916 CYTH4Q9UIA0 394 aa13.64□□□□□ -0.23
CNOT1-220ENST00000569916 ZFHX2Q9C0A1 2572 aaPredicted RBP13.63□□□□□ -0.23
CNOT1-220ENST00000569916 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 NEDD8-MDP1E9PL57 170 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 FOXN3O00409 490 aaPredicted RBP13.63□□□□□ -0.23
CNOT1-220ENST00000569916 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
CNOT1-220ENST00000569916 CACNG3O60359 315 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 TULP3O75386 442 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 LTFP02788 710 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 APODP05090 189 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 FNTBP49356 437 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 SEC13P55735 322 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 MYL5Q02045 173 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 KRT31Q15323 416 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 TRIP4Q15650 581 aaPredicted RBP13.63□□□□□ -0.23
CNOT1-220ENST00000569916 MSANTD2Q6P1R3 559 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 TPGS1Q6ZTW0 290 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 SYT13Q7L8C5 426 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 FMNL3Q8IVF7 1028 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 NAT16Q8N8M0 369 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 STK32AQ8WU08 396 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 RNF139Q8WU17 664 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 ACDQ96AP0 544 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 PLD4Q96BZ4 506 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 P2RY11Q96G91 374 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 BBS2Q9BXC9 721 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 SLC4A5Q9BY07 1137 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 DCLK3Q9C098 648 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 MIS12Q9H081 205 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 EPC1Q9H2F5 836 aa13.63□□□□□ -0.23
CNOT1-220ENST00000569916 ST7Q9NRC1 585 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms