RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 CDH8P55286 799 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 DMPKQ09013 629 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PTK2BQ14289 1009 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 MCF2L2Q86YR7 1114 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 RNF34Q969K3 372 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 FAM136AQ96C01 138 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PTCD3Q96EY7 689 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 KLHL8Q9P2G9 620 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ADAMTS6Q9UKP5 1117 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 SLC39A10Q9ULF5 831 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PLLPQ9Y342 182 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 HBS1LQ9Y450 684 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 CDY2AQ9Y6F7 541 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 CDY1Q9Y6F8 540 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ROBO3Q96MS0 1386 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 MED7O43513 233 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 SPATA31D3P0C874 917 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 C21orf59P57076 290 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 SPATA31D4Q6ZUB0 917 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 XPNPEP1Q9NQW7 623 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 TBC1D22BQ9NU19 505 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 RPS6KL1Q9Y6S9 549 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 CLUHO75153 1309 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 CNTNAP2Q9UHC6 1331 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 NFIBO00712 420 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 SPAG6O75602 509 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 COX4I1P13073 169 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 GPC3P51654 580 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 NR1H2P55055 460 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 CDH15P55291 814 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 NOMO3P69849 1222 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 GCNT1Q02742 428 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 TRAF2Q12933 501 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 PRKD1Q15139 912 aaPredicted RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 NANOGNBQ7Z5D8 188 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 ANKRD23Q86SG2 305 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 BORCS6Q96GS4 357 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 SNX25Q9H3E2 840 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 RSAD1Q9HA92 442 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 CISHQ9NSE2 258 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 RSL24D1Q9UHA3 163 aaKnown RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 USP18Q9UMW8 372 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 PCDHA10Q9Y5I2 948 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 HEMK1Q9Y5R4 338 aaPredicted RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 MYH3P11055 1940 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 WDR27A2RRH5 827 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 TRAFD1O14545 582 aaPredicted RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 SDC4P31431 198 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 GTF2A2P52657 109 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 CSE1LP55060 971 aaKnown RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 DLGAP5Q15398 846 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 TAF5Q15542 800 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 PPM1JQ5JR12 505 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 C10orf107Q8IVU9 208 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 MCPH1Q8NEM0 835 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 ANKRD36BP1Q96IX9 119 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 CNDP1Q96KN2 507 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 P2RX7Q99572 595 aaKnown RBP11.25□□□□□ -0.61
PALB2-206ENST00000568219 FAM96AQ9H5X1 160 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 PTTG2Q9NZH5 202 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 SLC17A6Q9P2U8 582 aa11.25□□□□□ -0.61
PALB2-206ENST00000568219 C4AP0C0L4 1744 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 USP12O75317 370 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 HSPA8P11142 646 aaKnown RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 KLRC2P26717 231 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 MIPP30301 263 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ARL4AP40617 200 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 STX1BP61266 288 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 YWHAEP62258 255 aaKnown RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 HPCAP84074 193 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 OCA2Q04671 838 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 PERM1Q5SV97 790 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 TRMT10BQ6PF06 316 aaKnown RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 TDRPQ86YL5 185 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 DAW1Q8N136 415 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 AFAP1L2Q8N4X5 818 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 LMO3Q8TAP4 145 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 LENG8Q96PV6 779 aaPredicted RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 RIT2Q99578 217 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 ILKAPQ9H0C8 392 aaPredicted RBP11.24□□□□□ -0.61
PALB2-206ENST00000568219 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 SLIT3O75094 1523 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 MYH1P12882 1939 aa11.24□□□□□ -0.61
PALB2-206ENST00000568219 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms