RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 GREM1O60565 184 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 STC2O76061 302 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 TDGF1P13385 188 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 GNA15P30679 374 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 COG7P83436 770 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 MESP2Q0VG99 397 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 FBXO43Q4G163 708 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 TCP11X2Q5H9J9 407 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 MIIPQ5JXC2 388 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 BHLHA9Q7RTU4 235 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 SFTPA1Q8IWL2 248 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 ZNF276Q8N554 614 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 ZBTB44Q8NCP5 570 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 CLEC4CQ8WTT0 213 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 ZNF606Q8WXB4 792 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 SIX2Q9NPC8 291 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 SFMBT1Q9UHJ3 866 aa16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 AJAP1Q9UKB5 411 aaPredicted RBP16.34■□□□□ 0.21
AC009088.3-201ENST00000563605 HELZP42694 1942 aaKnown RBP16.33■□□□□ 0.21
AC009088.3-201ENST00000563605 GTPBP10A4D1E9 387 aaKnown RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 BECN2A8MW95 431 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 NEDD8-MDP1E9PL57 170 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 K7ESF4 209 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 MED7O43513 233 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 KAT7O95251 611 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 KLKB1P03952 638 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 APODP05090 189 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 PNMA6AP0CW24 399 aaPredicted RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 CORO1AP31146 461 aaKnown RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 DAOAP59103 153 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 EMC10Q5UCC4 262 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 RBM43Q6ZSC3 357 aaKnown RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 C11orf57Q6ZUT1 292 aaPredicted RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 DENND1CQ8IV53 801 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 FMNL3Q8IVF7 1028 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 SCUBE3Q8IX30 993 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 CCDC33Q8N5R6 958 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 ENOX1Q8TC92 643 aaKnown RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 NELL1Q92832 810 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 HINFPQ9BQA5 517 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 BBS2Q9BXC9 721 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 FAM126AQ9BYI3 521 aaPredicted RBP16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 VPS16Q9H269 839 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 CNGB3Q9NQW8 809 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 ANO10Q9NW15 660 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 FANCLQ9NW38 375 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 ATG2BQ96BY7 2078 aa16.33■□□□□ 0.2
AC009088.3-201ENST00000563605 TBC1D3BA6NDS4 549 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 TRIM24O15164 1050 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 TULP3O75386 442 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 EEF1GP26641 437 aaKnown RBP16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 GPD2P43304 727 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 KCNMA1Q12791 1236 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 SRSF5Q13243 272 aaKnown RBP16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 LPAL2Q16609 132 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 STX1AQ16623 288 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 PATJQ8NI35 1801 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 HSFY1Q96LI6 401 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 LSM14BQ9BX40 385 aaKnown RBP16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 ZDHHC4Q9NPG8 344 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 OLA1Q9NTK5 396 aaKnown RBP16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 PLK2Q9NYY3 685 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 DEC1Q9P2X7 70 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 MYO16Q9Y6X6 1858 aa16.32■□□□□ 0.2
AC009088.3-201ENST00000563605 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 HOXC11O43248 304 aaPredicted RBP16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 TYRP14679 529 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 TIE1P35590 1138 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 GRIA2P42262 883 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 DMC1Q14565 340 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 Q6ZNB5 142 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 PRR23BQ6ZRT6 265 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 PASD1Q8IV76 773 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 USP33Q8TEY7 942 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 SHC3Q92529 594 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 DCLK3Q9C098 648 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 DNAJC17Q9NVM6 304 aaKnown RBP16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
AC009088.3-201ENST00000563605 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 MSI1O43347 362 aaKnown RBP16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 HRO43593 1189 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 LILRB5O75023 590 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 PAPSS2O95340 614 aaPredicted RBP16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 LTFP02788 710 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 PTMSP20962 102 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 PTK2Q05397 1052 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 KRT31Q15323 416 aa16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
AC009088.3-201ENST00000563605 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms