RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 GRSF1Q12849 480 aaKnown RBP eCLIP7.83□□□□□ -1.16
ZEB1-223ENST00000561304 BECN1Q14457 450 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 ZNF394Q53GI3 561 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 COBLL1Q53SF7 1204 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 PPP1R26Q5T8A7 1209 aaPredicted RBP7.83□□□□□ -1.16
ZEB1-223ENST00000561304 ZNF658Q5TYW1 1059 aaPredicted RBP7.83□□□□□ -1.16
ZEB1-223ENST00000561304 SNX30Q5VWJ9 437 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 ANKRD40Q6AI12 368 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 ISM2Q6H9L7 571 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 PRR23BQ6ZRT6 265 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 WDR5BQ86VZ2 330 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 LONP2Q86WA8 852 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 UNC93AQ86WB7 457 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 SYNPOQ8N3V7 929 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 OVCA2Q8WZ82 227 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 ZNF592Q92610 1267 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 ITPKCQ96DU7 683 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 NMUR1Q9HB89 426 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 EHD2Q9NZN4 543 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 MAN1B1Q9UKM7 699 aa7.83□□□□□ -1.16
ZEB1-223ENST00000561304 CKAP5Q14008 2032 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 K7EQS6 105 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 MDM4O15151 490 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 GREM1O60565 184 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 TBX18O95935 607 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 FAM200BP0CF97 657 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 EPB41P11171 864 aaKnown RBP7.82□□□□□ -1.16
ZEB1-223ENST00000561304 HNRNPLP14866 589 aaKnown RBP eCLIP7.82□□□□□ -1.162e-7■■□□□ 13.3
ZEB1-223ENST00000561304 DRD1P21728 446 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 PI4KAP42356 2102 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 ID4P47928 161 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 PPP3CCP48454 512 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 TUBP50607 506 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 SEC13P55735 322 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 NUCB2P80303 420 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 KDSRQ06136 332 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 SPEM2Q0P670 501 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 SIM2Q14190 667 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-223ENST00000561304 PPP2R5DQ14738 602 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 DHCR24Q15392 516 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 DCAF17Q5H9S7 520 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-223ENST00000561304 HECTD3Q5T447 861 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 KRT39Q6A163 491 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 RHBDF2Q6PJF5 856 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 BBS7Q8IWZ6 715 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 ADGRG2Q8IZP9 1017 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 PHTF2Q8N3S3 785 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 SLC4A11Q8NBS3 891 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 FBXL13Q8NEE6 735 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 PDZD8Q8NEN9 1154 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 SMARCE1Q969G3 411 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 CYFIP2Q96F07 1278 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 P2RY11Q96G91 374 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 HNRNPABQ99729 332 aaKnown RBP7.82□□□□□ -1.16
ZEB1-223ENST00000561304 NT5C1AQ9BXI3 368 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 IMPG2Q9BZV3 1241 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 CYP3A43Q9HB55 503 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 ZDHHC4Q9NPG8 344 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 NUDT5Q9UKK9 219 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 SPEGQ15772 3267 aa7.82□□□□□ -1.16
ZEB1-223ENST00000561304 A0A1W2PQH9 124 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 TRIM24O15164 1050 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 CETN3O15182 167 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 SLC16A3O15427 465 aaKnown RBP7.81□□□□□ -1.16
ZEB1-223ENST00000561304 TLR5O60602 858 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 FBXO45P0C2W1 286 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 ACO1P21399 889 aaKnown RBP7.81□□□□□ -1.16
ZEB1-223ENST00000561304 HOXA6P31267 233 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 GTF2H1P32780 548 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 RAD23BP54727 409 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 NR1H3Q13133 447 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 DMC1Q14565 340 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC6Q16204 474 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 RSPO4Q2I0M5 234 aaPredicted RBP7.81□□□□□ -1.16
ZEB1-223ENST00000561304 LY6G5CQ5SRR4 150 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 TCERG1LQ5VWI1 586 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 LAIR1Q6GTX8 287 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 SCD5Q86SK9 330 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 KBTBD6Q86V97 674 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 TTC30AQ86WT1 665 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 UBR7Q8N806 425 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 USP33Q8TEY7 942 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 SLC35C1Q96A29 364 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 TIGD1Q96MW7 591 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 GSDMAQ96QA5 445 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 DUSP9Q99956 384 aaKnown RBP7.81□□□□□ -1.16
ZEB1-223ENST00000561304 ZMYND15Q9H091 742 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 CISHQ9NSE2 258 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 RMND1Q9NWS8 449 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 COMMD8Q9NX08 183 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 RAB20Q9NX57 234 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 HCN2Q9UL51 889 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 SCML2Q9UQR0 700 aa7.81□□□□□ -1.16
ZEB1-223ENST00000561304 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.81□□□□□ -1.16
ZEB1-223ENST00000561304 E2F8A0AVK6 867 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 GOLGA6L4A6NEF3 574 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 TULP2O00295 520 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 BIN1O00499 593 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms