RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ARHGAP10A1A4S6 786 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 FCHO1O14526 889 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 TNNC2P02585 160 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 YBX3P16989 372 aaKnown RBP eCLIP14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ASPAP45381 313 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 CDK18Q07002 472 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 SNAPC2Q13487 334 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 CCNG2Q16589 344 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF699Q32M78 642 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ANKRD20A4Q4UJ75 823 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 LDLRAD1Q5T700 205 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 SMYD5Q6GMV2 418 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 CYP4F22Q6NT55 531 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 C1orf228Q6PIY5 440 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ARMCX2Q7L311 632 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ULK2Q8IYT8 1036 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 NUP93Q8N1F7 819 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF276Q8N554 614 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ATG4AQ8WYN0 398 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 KLHL4Q9C0H6 718 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 CDT1Q9H211 546 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 TUBGCP4Q9UGJ1 667 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 IP6K2Q9UHH9 426 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 R3HDM2Q9Y2K5 976 aaKnown RBP14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 TCRBV5S1A1TA0A578 114 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM191CA6NGB0 347 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 B2RBV5 119 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 POC1B-GALNT4F8VUJ3 575 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 VILLO15195 856 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 PEX1O43933 1283 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 CALB1P05937 261 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 WEE2P0C1S8 567 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 IQCF3P0C7M6 154 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 CYP2C8P10632 490 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 RALAP11233 206 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 EIF4BP23588 611 aaKnown RBP14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 ACADVLP49748 655 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 OSTNP61366 133 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 KLF1Q13351 362 aaPredicted RBP14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 MPP3Q13368 585 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 CCDC142Q17RM4 750 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM132AQ24JP5 1023 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 P3H1Q32P28 736 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF484Q5JVG2 852 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 BORAQ6PGQ7 559 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 SCARA5Q6ZMJ2 495 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 PRUNE1Q86TP1 453 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 CDR2LQ86X02 465 aaPredicted RBP14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM35BQ8NCS4 154 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 JADE3Q92613 823 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 MTBPQ96DY7 904 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 ANKRD36BP1Q96IX9 119 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 NFKBIZQ9BYH8 718 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 KCNK13Q9HB14 408 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 S100A14Q9HCY8 104 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 SAYSD1Q9NPB0 183 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 CLIC5Q9NZA1 410 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 USTQ9Y2C2 406 aa14.48□□□□□ -0.09
RABGGTA-220ENST00000560998 SPECC1L-ADORA2AF8WAN1 911 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 E2F6O75461 281 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 IL18RAPO95256 599 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 BAG2O95816 211 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 DLDP09622 509 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 VCLP18206 1134 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 CDH5P33151 784 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 RPL7AP62424 266 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 LAMC2Q13753 1193 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 PDK3Q15120 406 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF394Q53GI3 561 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 EFHC2Q5JST6 749 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 C1orf146Q5VVC0 180 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 TAPT1Q6NXT6 567 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 RAPH1Q70E73 1250 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 CROCCP3Q8IVE0 287 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 EXD1Q8NHP7 514 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 GAB3Q8WWW8 586 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 TFAP2BQ92481 460 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 UPF1Q92900 1129 aaKnown RBP eCLIP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 TTC1Q99614 292 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 HEMGNQ9BXL5 484 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF518BQ9C0D4 1074 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 RPF1Q9H9Y2 349 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 FBXO6Q9NRD1 293 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 PRMT7Q9NVM4 692 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 TAGLN3Q9UI15 199 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 PCDHGC3Q9UN70 934 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 PLXNB2O15031 1838 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 CAPN14A8MX76 684 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 LGALS2P05162 132 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 SMIM18P0DKX4 95 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 CXCL8P10145 99 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 CDK4P11802 303 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 INSRRP14616 1297 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 KRT4P19013 534 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 ADRA1DP25100 572 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 KLRC2P26717 231 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 RAB15P59190 212 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 IGBP1P78318 339 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms