RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 ADCY5O95622 1261 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CALCAP01258 141 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CFHP08603 1231 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 NCAM1P13591 858 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CHKAP35790 457 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 HARS2P49590 506 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 GSDMDP57764 484 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 USP4Q13107 963 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 MTF1Q14872 753 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 STXBP5Q5T5C0 1151 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 NUGGCQ68CJ6 796 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 TANGO2Q6ICL3 276 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 HTR3DQ70Z44 454 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 BHLHA9Q7RTU4 235 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 ZNF571Q7Z3V5 609 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CSGALNACT1Q8TDX6 532 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 SH3RF2Q8TEC5 729 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 ATP2A3Q93084 1043 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CCDC42Q96M95 316 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CYP2S1Q96SQ9 504 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 DDX50Q9BQ39 737 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 RNF38Q9H0F5 515 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 ISCUQ9H1K1 167 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 SMOC2Q9H3U7 446 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CCSER2Q9H7U1 834 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 BRD9Q9H8M2 597 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 NMUR1Q9HB89 426 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 WNT16Q9UBV4 365 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC12A6Q9UHW9 1150 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 CPQQ9Y646 472 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
RABGGTA-215ENST00000560207 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 LEFTY2O00292 366 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 DCXO43602 365 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 NRDCO43847 1150 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 AKR1B10O60218 316 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 DAB1O75553 588 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 NFATC1O95644 943 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 ERBB2P04626 1255 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 SP100P23497 879 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 MATKP42679 507 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 IFNAR2P48551 515 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 MRE11P49959 708 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 ZNF77Q15935 545 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 PREPLQ4J6C6 727 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 VITQ6UXI7 678 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 SND1Q7KZF4 910 aaKnown RBP eCLIP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 MON1BQ7L1V2 547 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 XYLT1Q86Y38 959 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 TXLNBQ8N3L3 684 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 PGAP3Q96FM1 320 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC2A13Q96QE2 648 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 KLF16Q9BXK1 252 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 C8orf33Q9H7E9 229 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 GRPEL1Q9HAV7 217 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 PARVAQ9NVD7 372 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 TLR6Q9Y2C9 796 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 C5orf42Q9H799 3197 aa12.59□□□□□ -0.39
RABGGTA-215ENST00000560207 TICRRQ7Z2Z1 1910 aa12.58□□□□□ -0.39
RABGGTA-215ENST00000560207 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 SIGLEC16A6NMB1 481 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 MAN2B1O00754 1011 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 AP5Z1O43299 807 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 GABBR2O75899 941 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 PRAMEF12O95522 483 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 KRT3P12035 628 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 VIPR2P41587 438 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 PRKCQQ04759 706 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 EFEMP1Q12805 493 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 TRIP4Q15650 581 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 CPA6Q8N4T0 437 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 ZNF557Q8N988 423 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 CCDC26Q8TAB7 109 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 EDAQ92838 391 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 PCDHB18PQ96TA0 734 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 NELL2Q99435 816 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 KXD1Q9BQD3 176 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 C11orf70Q9BRQ4 267 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms