RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 MARCH2Q9P0N8 246 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 APEX2Q9UBZ4 518 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 SMG5Q9UPR3 1016 aaKnown RBP8.59□□□□□ -1.03
SNX1-207ENST00000559401 NFE2L3Q9Y4A8 694 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 WDFY4Q6ZS81 3184 aa8.59□□□□□ -1.03
SNX1-207ENST00000559401 TBC1D3BA6NDS4 549 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 YJEFN3A6XGL0 299 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 E7ENQ6 273 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 K7ESF4 209 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 HOXC11O43248 304 aaPredicted RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 STC2O76061 302 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 KAT7O95251 611 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 TPM2P07951 284 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 TDGF1P13385 188 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 CORO1AP31146 461 aaKnown RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 HOXC13P31276 330 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 TIE1P35590 1138 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 EIF2DP41214 584 aaKnown RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 ZNF132P52740 706 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 DAOAP59103 153 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 SRSF5Q13243 272 aaKnown RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 DMC1Q14565 340 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 GAB4Q2WGN9 574 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 VWA3BQ502W6 1294 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 C10orf76Q5T2E6 689 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 BSPRYQ5W0U4 402 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 GRAMD4Q6IC98 578 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 PMF1Q6P1K2 205 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 NUDT18Q6ZVK8 323 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 LONP2Q86WA8 852 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 TMEM25Q86YD3 366 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 CCDC33Q8N5R6 958 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 KCTD13Q8WZ19 329 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 EZH1Q92800 747 aaPredicted RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 XPO6Q96QU8 1125 aaKnown RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 ZSWIM1Q9BR11 485 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 DCLK3Q9C098 648 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 CNGB3Q9NQW8 809 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 SAMSN1Q9NSI8 373 aaKnown RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 DNAJC17Q9NVM6 304 aaKnown RBP8.58□□□□□ -1.04
SNX1-207ENST00000559401 TAB2Q9NYJ8 693 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 PLK2Q9NYY3 685 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 DEC1Q9P2X7 70 aa8.58□□□□□ -1.04
SNX1-207ENST00000559401 GTPBP10A4D1E9 387 aaKnown RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 MSI1O43347 362 aaKnown RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 LILRB5O75023 590 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 TULP3O75386 442 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 FBXO21O94952 628 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 PAPSS2O95340 614 aaPredicted RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 KLF8O95600 359 aaPredicted RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 LTFP02788 710 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 CYBBP04839 570 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 TYRP14679 529 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 EEF1GP26641 437 aaKnown RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 PON1P27169 355 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 GRIA2P42262 883 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 RAPGEF1Q13905 1077 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 SIM2Q14190 667 aaPredicted RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 STX1AQ16623 288 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 PREPLQ4J6C6 727 aaPredicted RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 PKDCCQ504Y2 493 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 CT47A1Q5JQC4 288 aaPredicted RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 CCDC183Q5T5S1 534 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 PM20D1Q6GTS8 502 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 DENND1BQ6P3S1 775 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 BHLHA9Q7RTU4 235 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.57□□□□□ -1.04
SNX1-207ENST00000559401 DENND1CQ8IV53 801 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 PASD1Q8IV76 773 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 FMNL3Q8IVF7 1028 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 SFTPA1Q8IWL2 248 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ZNF276Q8N554 614 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 TSTD1Q8NFU3 115 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 USP33Q8TEY7 942 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 CLEC4CQ8WTT0 213 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 SLC35F5Q8WV83 523 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 RUBCNQ92622 972 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 NELL1Q92832 810 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 FAM149B1Q96BN6 582 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 EPC1Q9H2F5 836 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 PDCL3Q9H2J4 239 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ZDHHC4Q9NPG8 344 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ACP6Q9NPH0 428 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ABCC13Q9NSE7 274 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ANO10Q9NW15 660 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 WDR35Q9P2L0 1181 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 SFMBT1Q9UHJ3 866 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 DNAJC12Q9UKB3 198 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 GMEB2Q9UKD1 530 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 CNTN6Q9UQ52 1028 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 ZNF510Q9Y2H8 683 aa8.57□□□□□ -1.04
SNX1-207ENST00000559401 EML5Q05BV3 1969 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ANTXRLA6NF34 631 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 BECN2A8MW95 431 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 K7EQS6 105 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 CAPN9O14815 690 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 TRIM24O15164 1050 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 AXIN1O15169 862 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms