RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 LRMDAQ9H2I8 198 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 LRCH1Q9Y2L9 728 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MAFBQ9Y5Q3 323 aaPredicted RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 DYNC1LI2O43237 492 aaPredicted RBP12.59□□□□□ -0.39
SEC11A-206ENST00000558924 ZBED1O96006 694 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 ARL2P36404 184 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 PDE1BQ01064 536 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 TMED1Q13445 227 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 MXD4Q14582 209 aaPredicted RBP12.59□□□□□ -0.39
SEC11A-206ENST00000558924 LBX2Q6XYB7 198 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 RXFP2Q8WXD0 754 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 MTBPQ96DY7 904 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 DCLRE1BQ9H816 532 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
SEC11A-206ENST00000558924 TXNDC16Q9P2K2 825 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
SEC11A-206ENST00000558924 EVPLQ92817 2033 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 LIASO43766 372 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 PGM3O95394 542 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 ASMTLO95671 621 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 ATXN1P54253 815 aaKnown RBP12.59□□□□□ -0.39
SEC11A-206ENST00000558924 FAM47CQ5HY64 1035 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 TMCO4Q5TGY1 634 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 LRRC74BQ6ZQY2 392 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 FBXO27Q8NI29 283 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 HIC2Q96JB3 615 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 AGAP3Q96P47 875 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 OSMRQ99650 979 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 SIPA1L1O43166 1804 aa12.59□□□□□ -0.39
SEC11A-206ENST00000558924 TMEM191CA6NGB0 347 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 A8MXQ7 604 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 KBTBD13C9JR72 458 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 DNALI1O14645 258 aaPredicted RBP12.58□□□□□ -0.39
SEC11A-206ENST00000558924 PSTPIP1O43586 416 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 MSCO60682 206 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 LYNP07948 512 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 SESN2P58004 480 aaPredicted RBP12.58□□□□□ -0.39
SEC11A-206ENST00000558924 CAV1Q03135 178 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 LMNB2Q03252 620 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 PTPN11Q06124 597 aaPredicted RBP12.58□□□□□ -0.39
SEC11A-206ENST00000558924 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 CES3Q6UWW8 571 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 ZNF677Q86XU0 584 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 CDCA5Q96FF9 252 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 KRT82Q9NSB4 513 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 SNTG2Q9NY99 539 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 ATXN10Q9UBB4 475 aa12.58□□□□□ -0.39
SEC11A-206ENST00000558924 ZC3H11AO75152 810 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 KCNA4P22459 653 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 MAGEA8P43361 318 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 BCAR1P56945 870 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 NME3Q13232 169 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 PAN2Q504Q3 1202 aaKnown RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 WDR49Q8IV35 697 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 REPS2Q8NFH8 660 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 PGBD4Q96DM1 585 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 GOLGA2P5Q9HBQ8 144 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 AVENQ9NQS1 362 aaPredicted RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 MED7O43513 233 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 MAFO75444 373 aaPredicted RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 ATP5HO75947 161 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 MICAL2O94851 1124 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 ERBB2P04626 1255 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 DYNC1I2Q13409 638 aaKnown RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 TRIP10Q15642 601 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 C1orf127Q8N9H9 656 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 GATA6Q92908 595 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 ZBED3Q96IU2 234 aaPredicted RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 SLC17A6Q9P2U8 582 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 TSPAN16Q9UKR8 245 aa12.58□□□□□ -0.4
SEC11A-206ENST00000558924 SMG5Q9UPR3 1016 aaKnown RBP12.58□□□□□ -0.4
SEC11A-206ENST00000558924 SPECC1L-ADORA2AF8WAN1 911 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 UGT1A9O60656 530 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 HNRNPCP07910 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC11A-206ENST00000558924 ACAT1P24752 427 aaKnown RBP12.57□□□□□ -0.4
SEC11A-206ENST00000558924 IVDP26440 423 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 COG7P83436 770 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 PDK4Q16654 411 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 GOLGA7BQ2TAP0 167 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 MFSD4BQ5TF39 518 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 DUS1LQ6P1R4 473 aaKnown RBP12.57□□□□□ -0.4
SEC11A-206ENST00000558924 RBM12BQ8IXT5 1001 aaKnown RBP12.57□□□□□ -0.4
SEC11A-206ENST00000558924 ERLEC1Q96DZ1 483 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 FAM167AQ96KS9 214 aa12.57□□□□□ -0.4
SEC11A-206ENST00000558924 GPR20Q99678 358 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms