RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SELENOOQ9BVL4 669 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ASNSD1Q9NWL6 643 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 REXO2Q9Y3B8 237 aaKnown RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ANKRD62A6NC57 917 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 EIF3CLB5ME19 914 aaKnown RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 GLI1P08151 1106 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 DDX6P26196 483 aaKnown RBP eCLIP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 RFC1P35251 1148 aaPredicted RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ATP5C1P36542 298 aaKnown RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 AVPR1AP37288 418 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 PLEKHA7Q6IQ23 1121 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 OTOP3Q7RTS5 596 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 RNF139Q8WU17 664 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 MCEEQ96PE7 176 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 EIF3CQ99613 913 aaKnown RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ADAM33Q9BZ11 813 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 MSI1O43347 362 aaKnown RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 H2AFZP0C0S5 128 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 MBL2P11226 248 aaPredicted RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 TFE3P19532 575 aaPredicted RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 SCNN1AP37088 669 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 VIPR2P41587 438 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 AAK1Q2M2I8 961 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 PPP1R15BQ5SWA1 713 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 H2AFVQ71UI9 128 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 RIN3Q8TB24 985 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 USP13Q92995 863 aaPredicted RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 PPP1R9BQ96SB3 815 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 GKN1Q9NS71 199 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 PARVAQ9NVD7 372 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 RASAL2Q9UJF2 1139 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 FAM50BQ9Y247 325 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 USTQ9Y2C2 406 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 PCDHA13Q9Y5I0 950 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 CPQQ9Y646 472 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 MUC3AQ02505 3323 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 SIGLEC16A6NMB1 481 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 DAB1O75553 588 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 MYBL1P10243 752 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 MAGEA1P43355 309 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 GPC5P78333 572 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 SPA17Q15506 151 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 TDRD5Q8NAT2 981 aaKnown RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 CCDC112Q8NEF3 446 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 DQX1Q8TE96 717 aaKnown RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 ATXN2LQ8WWM7 1075 aaKnown RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 SMARCD2Q92925 531 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 RSPRY1Q96DX4 576 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 TRIM11Q96F44 468 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 ZFRQ96KR1 1074 aaKnown RBP15.97■□□□□ 0.15
NEDD1-213ENST00000557644 CFAP57Q96MR6 1250 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 KCNF1Q9H3M0 494 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 MARCH2Q9P0N8 246 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 CALCOCO1Q9P1Z2 691 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 DNMT3LQ9UJW3 386 aa15.97■□□□□ 0.15
NEDD1-213ENST00000557644 MATKP42679 507 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 KLHDC10Q6PID8 442 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 PARM1Q6UWI2 310 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 TAC4Q86UU9 113 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 ZNF276Q8N554 614 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 FGF14Q92915 247 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 ACSF2Q96CM8 615 aaPredicted RBP15.96■□□□□ 0.15
NEDD1-213ENST00000557644 LRRC3BQ96PB8 259 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 ASB2Q96Q27 587 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 TDP1Q9NUW8 608 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.96■□□□□ 0.15
NEDD1-213ENST00000557644 EPS15L1Q9UBC2 864 aa15.96■□□□□ 0.15
NEDD1-213ENST00000557644 RCCD1A6NED2 376 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 C2CD4BA6NLJ0 364 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 SCAMP3O14828 347 aaKnown RBP15.95■□□□□ 0.14
NEDD1-213ENST00000557644 CYP1A2P05177 515 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 FCARP24071 287 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 SLC7A9P82251 487 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 TANGO2Q6ICL3 276 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 DCUN1D2Q6PH85 259 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 BEND5Q7L4P6 421 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 RXFP2Q8WXD0 754 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 CTNNBL1Q8WYA6 563 aaPredicted RBP15.95■□□□□ 0.14
NEDD1-213ENST00000557644 WBP2Q969T9 261 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 RPP25Q9BUL9 199 aaKnown RBP15.95■□□□□ 0.14
NEDD1-213ENST00000557644 SYNJ2BP-COX16A0A087WUM0 186 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 A0A0U1RQJ8 604 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 ARHGAP6O43182 974 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 HMBSP08397 361 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 TMEM253P0C7T8 217 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 BMP1P13497 986 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 PDGFRAP16234 1089 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 NOS2P35228 1153 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 OGDHQ02218 1023 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 RAB6CQ53S08 254 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 SH3PXD2AQ5TCZ1 1133 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
NEDD1-213ENST00000557644 MSANTD2Q6P1R3 559 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 TADA2BQ86TJ2 420 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 ADAMTS19Q8TE59 1207 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 ATRIPQ8WXE1 791 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 RSAD2Q8WXG1 361 aa15.95■□□□□ 0.14
NEDD1-213ENST00000557644 CDK5RAP1Q96SZ6 601 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms