RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 C10orf120Q5SQS8 335 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 SFMBT2Q5VUG0 894 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 DENND1BQ6P3S1 775 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 GPRIN1Q7Z2K8 1008 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 ERICH1Q86X53 443 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 RNF214Q8ND24 703 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 SH3RF2Q8TEC5 729 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 SYN2Q92777 582 aaPredicted RBP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 OTUB2Q96DC9 234 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 RPP25Q9BUL9 199 aaKnown RBP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 ULBP1Q9BZM6 244 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 C8orf33Q9H7E9 229 aaPredicted RBP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 AIPL1Q9NZN9 384 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 ZNF510Q9Y2H8 683 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 MRPS17Q9Y2R5 130 aaKnown RBP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 LUC7L2Q9Y383 392 aaKnown RBP11.11□□□□□ -0.63
TMEM260-206ENST00000555046 SH3BP1Q9Y3L3 701 aa11.11□□□□□ -0.63
TMEM260-206ENST00000555046 E2F8A0AVK6 867 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 CAPN9O14815 690 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 CDH5P33151 784 aaPredicted RBP11.1□□□□□ -0.63
TMEM260-206ENST00000555046 RGS7P49802 495 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 PDCLQ13371 301 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 BSPRYQ5W0U4 402 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 VITQ6UXI7 678 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 VPS36Q86VN1 386 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 MFSD1Q9H3U5 465 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 GKN1Q9NS71 199 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 IGSF5Q9NSI5 407 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 ASNSD1Q9NWL6 643 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 LSM7Q9UK45 103 aaKnown RBP11.1□□□□□ -0.63
TMEM260-206ENST00000555046 CPQQ9Y646 472 aa11.1□□□□□ -0.63
TMEM260-206ENST00000555046 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 LEFTY2O00292 366 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 TULP2O00295 520 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 STK25O00506 426 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 EPHB6O15197 1021 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 NCAM2O15394 837 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 LTFP02788 710 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 TNFAIP3P21580 790 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 IFNAR2P48551 515 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 CLCN6P51797 869 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 DAOAP59103 153 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 YWHAZP63104 245 aaKnown RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ZBED6P86452 979 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ARID5AQ03989 594 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 MTA1Q13330 715 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 GRM2Q14416 872 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 MTF1Q14872 753 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ASIC2Q16515 512 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ITPRIPL2Q3MIP1 535 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 SPECC1LQ69YQ0 1117 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 SARM1Q6SZW1 724 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ZNF852Q6ZMS4 543 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 TOGARAM2Q6ZUX3 1019 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 SCD5Q86SK9 330 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 TMEM105Q8N8V8 129 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 OSCP1Q8WVF1 389 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 DDX1Q92499 740 aaKnown RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 FAM149B1Q96BN6 582 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 TRIM5Q9C035 493 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 CCSER2Q9H7U1 834 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ACP6Q9NPH0 428 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 ZNHIT6Q9NWK9 470 aaKnown RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 MARCH2Q9P0N8 246 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 WDR35Q9P2L0 1181 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 AJAP1Q9UKB5 411 aaPredicted RBP11.09□□□□□ -0.63
TMEM260-206ENST00000555046 CAPN11Q9UMQ6 739 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 IGF2RP11717 2491 aa11.09□□□□□ -0.63
TMEM260-206ENST00000555046 YJEFN3A6XGL0 299 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 E5RJQ4 531 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 E7ENQ6 273 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-206ENST00000555046 HSF2BPO75031 334 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 PRAMEF12O95522 483 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 NFATC1O95644 943 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 TBX18O95935 607 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 CALCAP01258 141 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 CFHP08603 1231 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 PNMA6AP0CW24 399 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-206ENST00000555046 NCAM1P13591 858 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 GBP1P32455 592 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 CHKAP35790 457 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 SCNN1AP37088 669 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 PBX1P40424 430 aa11.08□□□□□ -0.64
TMEM260-206ENST00000555046 NSFP46459 744 aaKnown RBP11.08□□□□□ -0.64
TMEM260-206ENST00000555046 HARS2P49590 506 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms