RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 LYPLA2O95372 231 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 HSD17B4P51659 736 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 SLC5A3P53794 718 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 CDK18Q07002 472 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 TKFCQ3LXA3 575 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 RARS2Q5T160 578 aaKnown RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 DCLRE1AQ6PJP8 1040 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 GSTA5Q7RTV2 222 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 TSPAN14Q8NG11 270 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 C7orf26Q96N11 449 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 RANBP9Q96S59 729 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 AVENQ9NQS1 362 aaPredicted RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 PSMD13Q9UNM6 376 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 SORCS3Q9UPU3 1222 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 POMPQ9Y244 141 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 ASTN2O75129 1339 aaPredicted RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 I3L4J1 428 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 ATP2A1O14983 1001 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 TRPA1O75762 1119 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 PRDX6P30041 224 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 HSPA13P48723 471 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 KCNC4Q03721 635 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 OASLQ15646 514 aaKnown RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 SLC7A5P1Q8MH63 180 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 CHPT1Q8WUD6 406 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 CCDC124Q96CT7 223 aaKnown RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 PLEKHA8Q96JA3 519 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 MFSD14AQ96MC6 490 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 DHRS4Q9BTZ2 278 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 NUF2Q9BZD4 464 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 GIN1Q9NXP7 522 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
SYNE3-203ENST00000554873 CDH22Q9UJ99 828 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 C21orf59P57076 290 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 RPS3AP61247 264 aaKnown RBP16.19■□□□□ 0.18
SYNE3-203ENST00000554873 DCAF6Q58WW2 860 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 RALGPS1Q5JS13 557 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 SLC27A3Q5K4L6 730 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 PLA2G4FQ68DD2 849 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 TMC2Q8TDI7 906 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 ACTRT2Q8TDY3 377 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 TMIGD2Q96BF3 282 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 GJD4Q96KN9 370 aaPredicted RBP16.19■□□□□ 0.18
SYNE3-203ENST00000554873 NSMCE3Q96MG7 304 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 FAM111AQ96PZ2 611 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 CNTN3Q9P232 1028 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 RABGEF1Q9UJ41 708 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 PPME1Q9Y570 386 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 NFIBO00712 420 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 STAMBPO95630 424 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 NPTX2P47972 431 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 MRPS9P82933 396 aaKnown RBP16.19■□□□□ 0.18
SYNE3-203ENST00000554873 XKR9Q5GH70 373 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 ITPRIPL1Q6GPH6 555 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 SLC39A4Q6P5W5 647 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 FASTKD5Q7L8L6 764 aaKnown RBP16.19■□□□□ 0.18
SYNE3-203ENST00000554873 ARID3BQ8IVW6 561 aaPredicted RBP16.19■□□□□ 0.18
SYNE3-203ENST00000554873 PAFAH2Q99487 392 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 NDEL1Q9GZM8 345 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 DEFB129Q9H1M3 183 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 ATAD3AQ9NVI7 634 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 NFASCO94856 1347 aa16.19■□□□□ 0.18
SYNE3-203ENST00000554873 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 TMEM126BQ8IUX1 230 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 ANKRD36BP1Q96IX9 119 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 FBXL18Q96ME1 805 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 GLIS2Q9BZE0 524 aaPredicted RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 UBIAD1Q9Y5Z9 338 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 DENND3A2RUS2 1198 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 SORBS2O94875 1100 aaKnown RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 PROSCO94903 275 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 ZBTB11O95625 1053 aaPredicted RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 MT-ND3P03897 115 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 FDX1P10109 184 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 AQP5P55064 265 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 TAS2R40P59535 323 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 CYP24A1Q07973 514 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 APOPT1Q96IL0 206 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 RILPQ96NA2 401 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 PLA2G6O60733 806 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 ESRRBO95718 433 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 EIF2S1P05198 315 aaKnown RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 GPX6P59796 221 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 GCNT1Q02742 428 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 PTP4A2Q12974 167 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 KLHL38Q2WGJ6 581 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 C6orf52Q5T4I8 152 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 NIPA1Q7RTP0 329 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 C4orf19Q8IY42 314 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 SEPT12Q8IYM1 358 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 CCDC33Q8N5R6 958 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms