RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 NUMBLQ9Y6R0 609 aa11.65□□□□□ -0.54
SRP54-205ENST00000554803 ANK1P16157 1881 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 A0A0U1RQF3 1178 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 LRRIQ4A6NIV6 560 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 VGLL3A8MV65 326 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 SMAPO00193 183 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 INPPL1O15357 1258 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 LILRB3O75022 631 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 CDH16O75309 829 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 PAPLNO95428 1278 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 OAS1P00973 400 aaKnown RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 EDN1P05305 212 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 CNPP09543 421 aaKnown RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 PRKCQQ04759 706 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 STRN3Q13033 797 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 UBXN2BQ14CS0 331 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 MLF2Q15773 248 aaPredicted RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 SGO2Q562F6 1265 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 N4BP2L1Q5TBK1 243 aaPredicted RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 LIN9Q5TKA1 542 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 RHBDF2Q6PJF5 856 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 EXOC8Q8IYI6 725 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 CCDC63Q8NA47 563 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 ATL2Q8NHH9 583 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 ZNF653Q96CK0 615 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 SELENOSQ9BQE4 189 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 NUP85Q9BW27 656 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 FRMD8P1Q9BZ68 369 aaPredicted RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 TRIM7Q9C029 511 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 MRPL47Q9HD33 250 aaKnown RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 PRMT8Q9NR22 394 aaPredicted RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 BATF3Q9NR55 127 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRP54-205ENST00000554803 ARHGAP28Q9P2N2 729 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 FETUBQ9UGM5 382 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 RAB23Q9ULC3 237 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 AKT3Q9Y243 479 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 MTF2Q9Y483 593 aaPredicted RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 SCINQ9Y6U3 715 aa11.64□□□□□ -0.55
SRP54-205ENST00000554803 SMG1Q96Q15 3661 aaKnown RBP11.64□□□□□ -0.55
SRP54-205ENST00000554803 FAM170BA6NMN3 283 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 TISP43B9A030 160 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 SNX3O60493 162 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 HNRNPCL1O60812 293 aaKnown RBP11.63□□□□□ -0.55
SRP54-205ENST00000554803 TTC4O95801 387 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 GALTP07902 379 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 RETP07949 1114 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 ATF2P15336 505 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 CYP11B1P15538 503 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 CHRNB2P17787 502 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 KCNA4P22459 653 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 EIF4BP23588 611 aaKnown RBP11.63□□□□□ -0.55
SRP54-205ENST00000554803 NAMPTP43490 491 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 FMO1Q01740 532 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 AUHQ13825 339 aaKnown RBP11.63□□□□□ -0.55
SRP54-205ENST00000554803 MESDQ14696 234 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 CNGA2Q16280 664 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 CCNG2Q16589 344 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 CLEC16AQ2KHT3 1053 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 DRICH1Q6PGQ1 229 aaPredicted RBP11.63□□□□□ -0.55
SRP54-205ENST00000554803 TSSK4Q6SA08 328 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
SRP54-205ENST00000554803 PRR23CQ6ZRP0 262 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 TDRPQ86YL5 185 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 RNF149Q8NC42 400 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 DYDC1Q8WWB3 177 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 CLDN23Q96B33 292 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 C18orf8Q96DM3 657 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 NLRP4Q96MN2 994 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 JPH2Q9BR39 696 aaPredicted RBP11.63□□□□□ -0.55
SRP54-205ENST00000554803 TRIM31Q9BZY9 425 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 NRDE2Q9H7Z3 1164 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 LTB4R2Q9NPC1 389 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 SEMA4GQ9NTN9 838 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 ZMIZ1Q9ULJ6 1067 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 ARL2BPQ9Y2Y0 163 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 PCDHB2Q9Y5E7 798 aa11.63□□□□□ -0.55
SRP54-205ENST00000554803 TDRD15B5MCY1 1934 aaKnown RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 IGSF10Q6WRI0 2623 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 A0A087WZ62 844 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 GDF9O60383 454 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 WFS1O76024 890 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 GJB6O95452 261 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 VIMP08670 466 aaKnown RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 PYGMP11217 842 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 SLC8A3P57103 927 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 COPS2P61201 443 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 MCL1Q07820 350 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 PPP3CAQ08209 521 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 MXD4Q14582 209 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 SIX1Q15475 284 aaPredicted RBP11.62□□□□□ -0.55
SRP54-205ENST00000554803 CSRP2Q16527 193 aa11.62□□□□□ -0.55
SRP54-205ENST00000554803 SNRNP35Q16560 246 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms