RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 TMEM25Q86YD3 366 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 SIX6OS1Q8N1H7 587 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 PHTF2Q8N3S3 785 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
HOXD8-204ENST00000544999 DCLK3Q9C098 648 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
HOXD8-204ENST00000544999 OLA1Q9NTK5 396 aaKnown RBP17.75■□□□□ 0.43
HOXD8-204ENST00000544999 MARK1Q9P0L2 795 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 NCDNQ9UBB6 729 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 STRIP2Q9ULQ0 834 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
HOXD8-204ENST00000544999 PTPRZ1P23471 2315 aaPredicted RBP17.75■□□□□ 0.43
HOXD8-204ENST00000544999 DMDP11532 3685 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 TNFRSF4P43489 277 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 MFAP3P55082 362 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 KDSRQ06136 332 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 MESP2Q0VG99 397 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 SIM2Q14190 667 aaPredicted RBP17.74■□□□□ 0.43
HOXD8-204ENST00000544999 HSF5Q4G112 596 aaPredicted RBP17.74■□□□□ 0.43
HOXD8-204ENST00000544999 CT47A1Q5JQC4 288 aaPredicted RBP17.74■□□□□ 0.43
HOXD8-204ENST00000544999 PRR23BQ6ZRT6 265 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 NAT16Q8N8M0 369 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 NDRG1Q92597 394 aaKnown RBP17.74■□□□□ 0.43
HOXD8-204ENST00000544999 HSFY1Q96LI6 401 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 XPO6Q96QU8 1125 aaKnown RBP17.74■□□□□ 0.43
HOXD8-204ENST00000544999 HHIPQ96QV1 700 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 POLR3BQ9NW08 1133 aaPredicted RBP17.74■□□□□ 0.43
HOXD8-204ENST00000544999 MARCH2Q9P0N8 246 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 WDR35Q9P2L0 1181 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 DEC1Q9P2X7 70 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 GMEB2Q9UKD1 530 aa17.74■□□□□ 0.43
HOXD8-204ENST00000544999 RIF1Q5UIP0 2472 aaKnown RBP17.73■□□□□ 0.43
HOXD8-204ENST00000544999 SLC12A8A0AV02 714 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 CACNG3O60359 315 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 TULP3O75386 442 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 CALCAP01258 141 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 KRT5P13647 590 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 LCP1P13796 627 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 SLC9A1P19634 815 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 RGS7P49802 495 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 DAOAP59103 153 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 SRSF5Q13243 272 aaKnown RBP17.73■□□□□ 0.43
HOXD8-204ENST00000544999 MAN2A1Q16706 1144 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 EXOC3L4Q17RC7 722 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 C2orf27AQ580R0 203 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 BSPRYQ5W0U4 402 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 SMYD5Q6GMV2 418 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 LAIR1Q6GTX8 287 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 PMF1Q6P1K2 205 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 TPGS1Q6ZTW0 290 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 NUDT18Q6ZVK8 323 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 DCLK2Q8N568 766 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 IRGQQ8WZA9 623 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 BBS2Q9BXC9 721 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 MMP17Q9ULZ9 603 aa17.73■□□□□ 0.43
HOXD8-204ENST00000544999 YJEFN3A6XGL0 299 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 E7ENQ6 273 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 AXIN1O15169 862 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 MED7O43513 233 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 APBB3O95704 486 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 KLKB1P03952 638 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 HMBSP08397 361 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 CHRM1P11229 460 aaPredicted RBP17.72■□□□□ 0.43
HOXD8-204ENST00000544999 TYRP14679 529 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 CORO1AP31146 461 aaKnown RBP17.72■□□□□ 0.43
HOXD8-204ENST00000544999 CHKAP35790 457 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 KIR2DL1P43626 348 aaPredicted RBP17.72■□□□□ 0.43
HOXD8-204ENST00000544999 PXNP49023 591 aaPredicted RBP17.72■□□□□ 0.43
HOXD8-204ENST00000544999 MEA1Q16626 185 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 CEP68Q76N32 757 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 GPR161Q8N6U8 529 aaKnown RBP17.72■□□□□ 0.43
HOXD8-204ENST00000544999 TERB1Q8NA31 727 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 RNF139Q8WU17 664 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 GAB3Q8WWW8 586 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 PLD4Q96BZ4 506 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 ABCC13Q9NSE7 274 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 DNAJC17Q9NVM6 304 aaKnown RBP17.72■□□□□ 0.43
HOXD8-204ENST00000544999 APEX2Q9UBZ4 518 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 EBF1Q9UH73 591 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 OTOGLQ3ZCN5 2332 aa17.72■□□□□ 0.43
HOXD8-204ENST00000544999 TBC1D3BA6NDS4 549 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 ANTXRLA6NF34 631 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 GABBR2O75899 941 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 FBXO21O94952 628 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 PON1P27169 355 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 TIE1P35590 1138 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 GPD2P43304 727 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 RPL34P49207 117 aaKnown RBP17.71■□□□□ 0.43
HOXD8-204ENST00000544999 TRIP4Q15650 581 aaPredicted RBP17.71■□□□□ 0.43
HOXD8-204ENST00000544999 LPAL2Q16609 132 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 GRAMD4Q6IC98 578 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 GJB7Q6PEY0 223 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 KIAA2013Q8IYS2 634 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 IL17RCQ8NAC3 791 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 TSTD1Q8NFU3 115 aa17.71■□□□□ 0.43
HOXD8-204ENST00000544999 GPT2Q8TD30 523 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms