RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 GPD2P43304 727 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 ACADSBP45954 432 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 DAOAP59103 153 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 SATB1Q01826 763 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 TYRO3Q06418 890 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 KRT31Q15323 416 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 PREPLQ4J6C6 727 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 NAIF1Q69YI7 327 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 CAVIN1Q6NZI2 390 aaKnown RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 DENND1BQ6P3S1 775 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 TSSK4Q6SA08 328 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 WBP2Q969T9 261 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 PNKPQ96T60 521 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 DCLK3Q9C098 648 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 VPS16Q9H269 839 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 ZSCAN32Q9NX65 697 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 R4GN57 208 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 SLC12A8A0AV02 714 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 GREM1O60565 184 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 RNF40O75150 1001 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 HMBSP08397 361 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 BPIFB4P59827 614 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 GAB4Q2WGN9 574 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 KLHDC7AQ5VTJ3 777 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 BHLHA9Q7RTU4 235 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 TMEM25Q86YD3 366 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 EDEM1Q92611 657 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 LSM14BQ9BX40 385 aaKnown RBP16.46■□□□□ 0.23
CCDC78-216ENST00000544996 MIS12Q9H081 205 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 WDR35Q9P2L0 1181 aa16.46■□□□□ 0.23
CCDC78-216ENST00000544996 HELZP42694 1942 aaKnown RBP16.46■□□□□ 0.23
CCDC78-216ENST00000544996 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-216ENST00000544996 HOXC11O43248 304 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-216ENST00000544996 GABBR2O75899 941 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 PAPSS2O95340 614 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-216ENST00000544996 LTFP02788 710 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 APODP05090 189 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 PTMSP20962 102 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 KRT9P35527 623 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 CHKAP35790 457 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 Q6ZNB5 142 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 FMNL3Q8IVF7 1028 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 SCUBE3Q8IX30 993 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 FAM71AQ8IYT1 594 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 NELL1Q92832 810 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 PLD4Q96BZ4 506 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 TRIM62Q9BVG3 475 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 BBS2Q9BXC9 721 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 SLC4A5Q9BY07 1137 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 ARHGEF4Q9NR80 690 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 DEC1Q9P2X7 70 aa16.45■□□□□ 0.22
CCDC78-216ENST00000544996 AJAP1Q9UKB5 411 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-216ENST00000544996 HBS1LQ9Y450 684 aaKnown RBP16.45■□□□□ 0.22
CCDC78-216ENST00000544996 CACNA1HO95180 2353 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 MYO16Q9Y6X6 1858 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 CHURC1-FNTBB4DL54 471 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 GFRA3O60609 400 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 KAT7O95251 611 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 UCHL3P15374 230 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 CORO1AP31146 461 aaKnown RBP16.44■□□□□ 0.22
CCDC78-216ENST00000544996 GRIA2P42262 883 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 SLC6A11P48066 632 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 RPL34P49207 117 aaKnown RBP16.44■□□□□ 0.22
CCDC78-216ENST00000544996 HARS2P49590 506 aaKnown RBP16.44■□□□□ 0.22
CCDC78-216ENST00000544996 SNX16P57768 344 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
CCDC78-216ENST00000544996 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 TPGS1Q6ZTW0 290 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 DENND1CQ8IV53 801 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 NAT16Q8N8M0 369 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 ZBTB44Q8NCP5 570 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 RPLP0P6Q8NHW5 317 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 ACDQ96AP0 544 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 XPO6Q96QU8 1125 aaKnown RBP16.44■□□□□ 0.22
CCDC78-216ENST00000544996 LHX5Q9H2C1 402 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 SLC8A2Q9UPR5 921 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 CEP83Q9Y592 693 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 FHOD1Q9Y613 1164 aa16.44■□□□□ 0.22
CCDC78-216ENST00000544996 NEDD8-MDP1E9PL57 170 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 LMNAP02545 664 aaKnown RBP16.43■□□□□ 0.22
CCDC78-216ENST00000544996 KLKB1P03952 638 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 TDGF1P13385 188 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 NCAM1P13591 858 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 TYRP14679 529 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 CLCN1P35523 988 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
CCDC78-216ENST00000544996 KDSRQ06136 332 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 PDCLQ13371 301 aa16.43■□□□□ 0.22
CCDC78-216ENST00000544996 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms