RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 PDPK1O15530 556 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 TCEA3O75764 348 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 NAMPTP43490 491 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 BPIFB3P59826 476 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 COPZ1P61923 177 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 TAP1Q03518 808 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
AP3B2-210ENST00000543938 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SLC44A1Q8WWI5 657 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 JADE3Q92613 823 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 NLRP4Q96MN2 994 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SNX18Q96RF0 628 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 WACQ9BTA9 647 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 BTBD2Q9BX70 525 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 EMILIN2Q9BXX0 1053 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SLC2A11Q9BYW1 496 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 GHITMQ9H3K2 345 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SMYD3Q9H7B4 428 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 DNMT3BQ9UBC3 853 aaKnown RBP13.09□□□□□ -0.31
AP3B2-210ENST00000543938 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 GMEB2Q9UKD1 530 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 PCM1Q15154 2024 aa13.09□□□□□ -0.31
AP3B2-210ENST00000543938 BTNL10A8MVZ5 291 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 CDH1P12830 882 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ATF4P18848 351 aaPredicted RBP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 DNAJB2P25686 324 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ALDH1A3P47895 512 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 SLC18A1P54219 525 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ESRRGP62508 458 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ENPEPQ07075 957 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 BNIP3Q12983 259 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 C5orf22Q49AR2 442 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 EARS2Q5JPH6 523 aaKnown RBP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 HABP4Q5JVS0 413 aaKnown RBP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 AACSQ86V21 672 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 CPNE9Q8IYJ1 553 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 CCDC89Q8N998 374 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 TMEM79Q9BSE2 394 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 THTPAQ9BU02 230 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ANKFY1Q9P2R3 1169 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 SNX24Q9Y343 169 aa13.08□□□□□ -0.31
AP3B2-210ENST00000543938 ITGB4P16144 1822 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 E7EWF7 191 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 F8W810 466 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 RNF103O00237 685 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 DYNC1LI2O43237 492 aaPredicted RBP13.08□□□□□ -0.32
AP3B2-210ENST00000543938 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
AP3B2-210ENST00000543938 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
AP3B2-210ENST00000543938 ANKRD39Q53RE8 183 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 SLC25A41Q8N5S1 370 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.32
AP3B2-210ENST00000543938 FANK1Q8TC84 345 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 DENND1AQ8TEH3 1009 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 SGK3Q96BR1 496 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 CLPTM1LQ96KA5 538 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 C1orf50Q9BV19 199 aa13.08□□□□□ -0.32
AP3B2-210ENST00000543938 ESYT2A0FGR8 921 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 FOXO6A8MYZ6 492 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 TMX2-CTNND1H3BSU7 103 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 ASNA1O43681 348 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 DYRK3O43781 588 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 SNAP91O60641 907 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 MTHFD1P11586 935 aaKnown RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 CD247P20963 164 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 HSPA13P48723 471 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 ZNF200P98182 395 aaPredicted RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 GALNT2Q10471 571 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 SEPT1Q8WYJ6 367 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 ZSCAN5AQ9BUG6 496 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 KRT10P13645 584 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 GABRB3P28472 473 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 GNA12Q03113 381 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 LYSMD3Q7Z3D4 306 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 HDAC2Q92769 488 aaKnown RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 FAM149B1Q96BN6 582 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 TSEN34Q9BSV6 310 aaKnown RBP13.07□□□□□ -0.32
AP3B2-210ENST00000543938 MCMBPQ9BTE3 642 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 RNF112Q9ULX5 631 aa13.07□□□□□ -0.32
AP3B2-210ENST00000543938 SIK3Q9Y2K2 1263 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms