RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RPL34P49207 117 aaKnown RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 PGFP49763 221 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 SULT1E1P49888 294 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 SLC7A9P82251 487 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 COG7P83436 770 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 CDK17Q00537 523 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 C1QBPQ07021 282 aaKnown RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 HTR4Q13639 388 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ZNF268Q14587 947 aaPredicted RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 GSE1Q14687 1217 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 MTF1Q14872 753 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 TAF5Q15542 800 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ARHGAP29Q52LW3 1261 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 DCAF6Q58WW2 860 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 HGSNATQ68CP4 663 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 DCUN1D2Q6PH85 259 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 VITQ6UXI7 678 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 SND1Q7KZF4 910 aaKnown RBP eCLIP6.6□□□□□ -1.35
LTBR-212ENST00000543542 XYLT1Q86Y38 959 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 PHF13Q86YI8 300 aaPredicted RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 MFSD6LQ8IWD5 586 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 DEFB106AQ8N104 65 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 TC2NQ8N9U0 490 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ADAM32Q8TC27 787 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 USP13Q92995 863 aaPredicted RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 ZNF653Q96CK0 615 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 SERPINB11Q96P15 392 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 PLA2G2FQ9BZM2 168 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 NHEJ1Q9H9Q4 299 aaPredicted RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 GKN1Q9NS71 199 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ASNSD1Q9NWL6 643 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 OSER1Q9NX31 292 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 DUS2Q9NX74 493 aaKnown RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 OBP2AQ9NY56 170 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 TAS2R14Q9NYV8 317 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.6□□□□□ -1.35
LTBR-212ENST00000543542 CFAP97Q9P2B7 532 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ARHGAP20Q9P2F6 1191 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 FBXL21Q9UKT6 434 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 STAP1Q9ULZ2 295 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ARHGAP26Q9UNA1 814 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 SORCS3Q9UPU3 1222 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 NAALADL1Q9UQQ1 740 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 CCL26Q9Y258 94 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 UNC80Q8N2C7 3258 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 A0A087X0T9 212 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SSU72P8A0A1W2PR75 194 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 C19orf67A6NJJ6 358 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 ANHXE9PGG2 379 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 M0QYT0 321 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SLC9A3R1O14745 358 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 SCAMP3O14828 347 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 ATMINO43313 823 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 MSI1O43347 362 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 DAB1O75553 588 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 GABBR2O75899 941 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MOCS2O96007 188 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 APOEP02649 317 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 FAM228BP0C875 321 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MYBL1P10243 752 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 GZMAP12544 262 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 FCARP24071 287 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 WEE1P30291 646 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SDC4P31431 198 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 HNRNPH3P31942 346 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 NOS2P35228 1153 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 HARS2P49590 506 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 KPNA1P52294 538 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 TBX4P57082 545 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 GSDMDP57764 484 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 PFKPQ01813 784 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 DEUP1Q05D60 604 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 GFPT1Q06210 699 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 NR1H3Q13133 447 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 NME3Q13232 169 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SPA17Q15506 151 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 CDO1Q16878 200 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SYPL2Q5VXT5 272 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 ALKBH5Q6P6C2 394 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 KLHDC10Q6PID8 442 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 WDR59Q6PJI9 974 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 OLFML1Q6UWY5 402 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MON1BQ7L1V2 547 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SLC26A9Q7LBE3 791 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 BHLHA9Q7RTU4 235 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 DNAAF5Q86Y56 855 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MCOLN2Q8IZK6 566 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 SLC44A3Q8N4M1 653 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 TTC8Q8TAM2 541 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 DQX1Q8TE96 717 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 CTNNBL1Q8WYA6 563 aaPredicted RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 IRF7Q92985 503 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 PLD4Q96BZ4 506 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 PIWIL1Q96J94 861 aaKnown RBP6.59□□□□□ -1.35
LTBR-212ENST00000543542 VCPIP1Q96JH7 1222 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 ZFYVE19Q96K21 471 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 MCEEQ96PE7 176 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 PANX2Q96RD6 677 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 CHP1Q99653 195 aa6.59□□□□□ -1.35
LTBR-212ENST00000543542 RPP25Q9BUL9 199 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms