RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 KLKB1P03952 638 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 ADH5P11766 374 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 LCP1P13796 627 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 ZNF18P17022 549 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 CLCN1P35523 988 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 EIF2DP41214 584 aaKnown RBP16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 CXCL12P48061 93 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 MRE11P49959 708 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 COG7P83436 770 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 SATB1Q01826 763 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 EFEMP1Q12805 493 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 NCAPHQ15003 741 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 FBXO43Q4G163 708 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 KLHDC7AQ5VTJ3 777 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 PKN3Q6P5Z2 889 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 TSSK4Q6SA08 328 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 TMEM25Q86YD3 366 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 FAM71AQ8IYT1 594 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 ZBTB44Q8NCP5 570 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 SLC4A5Q9BY07 1137 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 FAM126AQ9BYI3 521 aaPredicted RBP16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 SPHK2Q9NRA0 654 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 OLA1Q9NTK5 396 aaKnown RBP16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 MARCH2Q9P0N8 246 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 LIMA1Q9UHB6 759 aaKnown RBP16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 CYTH4Q9UIA0 394 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 LSM7Q9UK45 103 aaKnown RBP16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 ATG2BQ96BY7 2078 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 K7EQS6 105 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 K7ESF4 209 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 THAP12O43422 761 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 RNF40O75150 1001 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 FBXO21O94952 628 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 USP8P40818 1118 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 SLC6A11P48066 632 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 GAD2Q05329 585 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 MESP2Q0VG99 397 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 BTBD8Q5XKL5 378 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 RSRC2Q7L4I2 434 aaKnown RBP16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 TMEM110Q86TL2 294 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 ALYREFQ86V81 257 aaKnown RBP16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 C12orf40Q86WS4 652 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 ETFBKMTQ8IXQ9 262 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 PHTF2Q8N3S3 785 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 WDTC1Q8N5D0 677 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 CLEC4CQ8WTT0 213 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 VPS16Q9H269 839 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 PLCB1Q9NQ66 1216 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 ABCC13Q9NSE7 274 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 ZSCAN32Q9NX65 697 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 RASAL2Q9UJF2 1139 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 PCDHGC3Q9UN70 934 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 PCDHGA2Q9Y5H1 932 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 R4GN57 208 aa16.18■□□□□ 0.18
ECHDC2-223ENST00000542552 CFAP54Q96N23 3096 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 RIF1Q5UIP0 2472 aaKnown RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 PIK3R2O00459 728 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 PES1O00541 588 aaKnown RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 CHRM1P11229 460 aaPredicted RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 UCHL3P15374 230 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 HOXA6P31267 233 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 ACADSBP45954 432 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 PTK2Q05397 1052 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 PPP2R5DQ14738 602 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 TRIP4Q15650 581 aaPredicted RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 CAVIN1Q6NZI2 390 aaKnown RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 MSANTD2Q6P1R3 559 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 ZC3H14Q6PJT7 736 aaKnown RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 SCUBE3Q8IX30 993 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 EDEM1Q92611 657 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 PNKPQ96T60 521 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 DCLK3Q9C098 648 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 LHX5Q9H2C1 402 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 SEMA4AQ9H3S1 761 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 MARK1Q9P0L2 795 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 STRIP2Q9ULQ0 834 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 ZNF510Q9Y2H8 683 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 FHOD1Q9Y613 1164 aa16.17■□□□□ 0.18
ECHDC2-223ENST00000542552 SLC12A8A0AV02 714 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 LILRB5O75023 590 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 ATG13O75143 517 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 LTFP02788 710 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 FYNP06241 537 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 PNMA6AP0CW24 399 aaPredicted RBP16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 CORO1AP31146 461 aaKnown RBP16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 COPB1P53618 953 aaKnown RBP16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 NRLP54845 237 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 DRAP1Q14919 205 aaPredicted RBP16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 KLHL40Q2TBA0 621 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 BEND5Q7L4P6 421 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 SLC47A2Q86VL8 602 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 FMNL3Q8IVF7 1028 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 FAM217AQ8IXS0 508 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 RNF139Q8WU17 664 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 PLD4Q96BZ4 506 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 P2RY11Q96G91 374 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 LSM14BQ9BX40 385 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms