RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 KCNA10Q16322 511 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 CYP4V2Q6ZWL3 525 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 TLK2Q86UE8 772 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 KLHDC9Q8NEP7 349 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 HEXIM2Q96MH2 286 aaKnown RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 ANKRD27Q96NW4 1050 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 RNF157Q96PX1 679 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PEBP4Q96S96 227 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 IFT122Q9HBG6 1241 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PAK5Q9P286 719 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 LNPEPQ9UIQ6 1025 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 ZFP69BQ9UJL9 534 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 BARX2Q9UMQ3 279 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 CHMP2BQ9UQN3 213 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 A0A1W2PQ45 241 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 A0A1W2PQY0 241 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 TCRBV9S1A1TA0A576 114 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 CFAP69A5D8W1 941 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 DYNC1LI2O43237 492 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 LPXNO60711 386 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 TGDSO95455 350 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 IL1BP01584 269 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 INHBAP08476 426 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 CLCN3P51790 818 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 GJA9P57773 515 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PTK7Q13308 1070 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 BOLA3Q53S33 107 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 LCLAT1Q6UWP7 414 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 SLC39A5Q6ZMH5 540 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 SH2D5Q6ZV89 423 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 IGDCC3Q8IVU1 814 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 TAB3Q8N5C8 712 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 MAB21L3Q8N8X9 362 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 RTP4Q96DX8 246 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 APOPT1Q96IL0 206 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 HPDLQ96IR7 371 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 ZNF668Q96K58 619 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-207ENST00000538862 TUBB6Q9BUF5 446 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 TRIM55Q9BYV6 548 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 NPHS2Q9NP85 383 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 SLC17A7Q9P2U7 560 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PHF24Q9UPV7 400 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 ATP11BQ9Y2G3 1177 aa15.11■□□□□ 0.01
CDCA3-207ENST00000538862 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 PDGFRAP16234 1089 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 TGM2P21980 687 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 PTPN4P29074 926 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 NEK3P51956 506 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 ACLYP53396 1101 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 MMRN1Q13201 1228 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 STILQ15468 1287 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 TAF1BQ53T94 588 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-207ENST00000538862 ZNF484Q5JVG2 852 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 GNASQ5JWF2 1037 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 CCSAPQ6IQ19 270 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-207ENST00000538862 NPNTQ6UXI9 565 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 UBA3Q8TBC4 463 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-207ENST00000538862 RXFP2Q8WXD0 754 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 COPS5Q92905 334 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 FAF2Q96CS3 445 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 TBC1D10AQ9BXI6 508 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 UPF3AQ9H1J1 476 aaKnown RBP15.1■□□□□ 0.01
CDCA3-207ENST00000538862 TLE6Q9H808 572 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 USP29Q9HBJ7 922 aa15.1■□□□□ 0.01
CDCA3-207ENST00000538862 E7ENQ6 273 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 H7C0C1 242 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 GOLGA8RI6L899 631 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 DPYSL4O14531 572 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 DIAPH2O60879 1101 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 C22orf31O95567 290 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 ASGR1P07306 291 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 ETV4P43268 484 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 ATP5OP48047 213 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 AMHR2Q16671 573 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 KBTBD12Q3ZCT8 623 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 TRIM60Q495X7 471 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 PLEKHG4Q58EX7 1191 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 IQSEC1Q6DN90 963 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 OR6B2Q6IFH4 312 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 ZC3H18Q86VM9 953 aaKnown RBP15.09■□□□□ 0.01
CDCA3-207ENST00000538862 NT5DC4Q86YG4 428 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 TEKT4Q8WW24 435 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 APBB2Q92870 758 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 TSSK1BQ9BXA7 367 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 SPC25Q9HBM1 224 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 BATF3Q9NR55 127 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 ERAP1Q9NZ08 941 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 ITGA11Q9UKX5 1188 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 WDR91A4D1P6 747 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 TTC36A6NLP5 189 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 TRDMT1O14717 391 aaKnown RBP15.09■□□□□ 0.01
CDCA3-207ENST00000538862 PIAS1O75925 651 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 RPSAP08865 295 aaKnown RBP15.09■□□□□ 0.01
CDCA3-207ENST00000538862 MAGEA6P43360 314 aa15.09■□□□□ 0.01
CDCA3-207ENST00000538862 YWHAGP61981 247 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDCA3-207ENST00000538862 RBP5P82980 135 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms