RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SHKBP1Q8TBC3 707 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 RAD54LQ92698 747 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 CEP95Q96GE4 821 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 TXNDC15Q96J42 360 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 VPS35Q96QK1 796 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 COPS7BQ9H9Q2 264 aaPredicted RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 CHST7Q9NS84 486 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 THG1LQ9NWX6 298 aaKnown RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 PI4KBQ9UBF8 816 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 TRAF6Q9Y4K3 522 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 PPME1Q9Y570 386 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 ESYT2A0FGR8 921 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 EML1O00423 815 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 ACOX3O15254 700 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 SERPINB1P30740 379 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 IL6STP40189 918 aaPredicted RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 ETV4P43268 484 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 PRKCQQ04759 706 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 FCHO2Q0JRZ9 810 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 NFATC3Q12968 1075 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 GRB10Q13322 594 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 PPP6R3Q5H9R7 873 aaPredicted RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 DCAF17Q5H9S7 520 aaPredicted RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 FAM47CQ5HY64 1035 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 RASGRP4Q8TDF6 673 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 ACDQ96AP0 544 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 SDCCAG3Q96C92 435 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 CFAP36Q96G28 342 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 CNDP2Q96KP4 475 aaKnown RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 ZNF597Q96LX8 424 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 FAM111AQ96PZ2 611 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 CALN1Q9BXU9 219 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 STN1Q9H668 368 aaKnown RBP8.81□□□□□ -1
SRGAP1-202ENST00000537556 FANCEQ9HB96 536 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.81□□□□□ -1
SRGAP1-202ENST00000537556 COMMD8Q9NX08 183 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 ARHGAP26Q9UNA1 814 aa8.81□□□□□ -1
SRGAP1-202ENST00000537556 SDR42E2A6NKP2 422 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 CCRL2O00421 344 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 LRRN2O75325 713 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 GCATO75600 419 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 MTA2O94776 668 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 CD247P20963 164 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 CES1P23141 567 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 TMPRSS15P98073 1019 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 CTBSQ01459 385 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 ORC2Q13416 577 aaPredicted RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 COL19A1Q14993 1142 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 GPR162Q16538 588 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 BRSK1Q8TDC3 778 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 APOPT1Q96IL0 206 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 RMDN3Q96TC7 470 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 UQCC2Q9BRT2 126 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 MXD3Q9BW11 206 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 ZNF341Q9BYN7 854 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 ARMT1Q9H993 441 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.8□□□□□ -1
SRGAP1-202ENST00000537556 NEK6Q9HC98 313 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 SIX2Q9NPC8 291 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 PCDHA6Q9UN73 950 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 SCAF8Q9UPN6 1271 aaKnown RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 PCDHA8Q9Y5H6 950 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 AFDNP55196 1824 aaKnown RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 CCNT1O60563 726 aaKnown RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 SORBS2O94875 1100 aaKnown RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 FTLP02792 175 aaPredicted RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 NAGAP17050 411 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 ITIH1P19827 911 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 GRK2P25098 689 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 HPCAL1P37235 193 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 ZNF135P52742 658 aaPredicted RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 GALNT2Q10471 571 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 PERM1Q5SV97 790 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 IDO2Q6ZQW0 420 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 RALGPS2Q86X27 583 aaPredicted RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 CLIP4Q8N3C7 705 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 TTC30BQ8N4P2 665 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 Q8N9G6 341 aaPredicted RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 ASCC1Q8N9N2 400 aaKnown RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 DAGLBQ8NCG7 672 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 GALNT6Q8NCL4 622 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 PLBD2Q8NHP8 589 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 E2F7Q96AV8 911 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 NACC1Q96RE7 527 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 CIB1Q99828 191 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 SYT11Q9BT88 431 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 SEZ6LQ9BYH1 1024 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 CLPBQ9H078 707 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 PRPF19Q9UMS4 504 aaKnown RBP8.8□□□□□ -1
SRGAP1-202ENST00000537556 ZHX2Q9Y6X8 837 aa8.8□□□□□ -1
SRGAP1-202ENST00000537556 IQANK1A0A1B0GTG1 560 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 EVPLLA8MZ36 301 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 H7C0C1 242 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 M0R2N6 131 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 VWA5AO00534 786 aa8.79□□□□□ -1
SRGAP1-202ENST00000537556 ADAMTS3O15072 1205 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms