RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 MOSPD1Q9UJG1 213 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 PTBP2Q9UKA9 531 aaKnown RBP5.4□□□□□ -1.54
SNHG1-201ENST00000535076 GMEB2Q9UKD1 530 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 STX8Q9UNK0 236 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 ERGIC3Q9Y282 383 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 B3GNT3Q9Y2A9 372 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 LEMD3Q9Y2U8 911 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 PMF1-BGLAPU3KQ54 211 aa5.4□□□□□ -1.54
SNHG1-201ENST00000535076 FRMPD4Q14CM0 1322 aa5.4□□□□□ -1.55
SNHG1-201ENST00000535076 TEX14Q8IWB6 1497 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 VPS37CA5D8V6 355 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 ARHGEF35A5YM69 484 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TRIM75PA6NK02 468 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 C16orf96A6NNT2 1141 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CHURC1-FNTBB4DL54 471 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 NDUFS8O00217 210 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 FANCGO15287 622 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TMPRSS2O15393 492 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PDPK1O15530 556 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 DNAJB5O75953 348 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PLGP00747 810 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TFRCP02786 760 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CYP1A1P04798 512 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 HEXBP07686 556 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 POLR2MP0CAP2 368 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TPBGLP0DKB5 382 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 ANPEPP15144 967 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 HOXB8P17481 243 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 HLA-FP30511 346 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 GALNSP34059 522 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TRHRP34981 398 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 HNF4AP41235 474 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SLC9A3P48764 834 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 STARP49675 285 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 GALK1P51570 392 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TGFB2P61812 414 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 GUCY2DQ02846 1103 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 RESTQ13127 1097 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 KCNAB2Q13303 367 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 COTL1Q14019 142 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SF3B4Q15427 424 aaKnown RBP eCLIP5.39□□□□□ -1.552e-51■■■■■ 28.3
SNHG1-201ENST00000535076 KCNJ8Q15842 424 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CCNG2Q16589 344 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 KRT24Q2M2I5 525 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TBRG1Q3YBR2 411 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 GALNTL6Q49A17 601 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 ANO6Q4KMQ2 910 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 RTP2Q5QGT7 225 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TMEM63BQ5T3F8 832 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SEZ6L2Q6UXD5 910 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 MPRIPQ6WCQ1 1025 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CCNI2Q6ZMN8 369 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CATSPERGQ6ZRH7 1159 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TMTC3Q6ZXV5 915 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 DYMQ7RTS9 669 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SLFN11Q7Z7L1 901 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 ASPGQ86U10 573 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CCDC25Q86WR0 208 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CDR2LQ86X02 465 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 NME9Q86XW9 330 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TRIM59Q8IWR1 403 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 UNC45BQ8IWX7 931 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 MREGQ8N565 214 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 MARCH10Q8NA82 808 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 LPCAT1Q8NF37 534 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 IL17RDQ8NFM7 739 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 GOT1L1Q8NHS2 421 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 DENND1AQ8TEH3 1009 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 AENQ8WTP8 325 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SLC44A1Q8WWI5 657 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 STON2Q8WXE9 905 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 JPH3Q8WXH2 748 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 MRPS27Q92552 414 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 CAVIN3Q969G5 261 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 LRRC59Q96AG4 307 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 RAB7BQ96AH8 199 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 RAD51AP1Q96B01 352 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 LRGUKQ96M69 825 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 ASB16Q96NS5 453 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PSMG3-AS1Q96PY0 264 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 PANX2Q96RD6 677 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 YME1L1Q96TA2 773 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SEC62Q99442 399 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 NTPCRQ9BSD7 190 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 LSG1Q9H089 658 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 DDX47Q9H0S4 455 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TNKS2Q9H2K2 1166 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 THAP9Q9H5L6 903 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TFB2MQ9H5Q4 396 aaKnown RBP5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SH2D4AQ9H788 454 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TMEM206Q9H813 350 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 SP110Q9HB58 689 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 TRPV4Q9HBA0 871 aa5.39□□□□□ -1.55
SNHG1-201ENST00000535076 LY9Q9HBG7 655 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms