RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 YAF2Q8IY57 180 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 DEFB106AQ8N104 65 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 TTC16Q8NEE8 873 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 OLIG1Q8TAK6 271 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 ADAMTS19Q8TE59 1207 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 SH3RF2Q8TEC5 729 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 RSAD2Q8WXG1 361 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 KXD1Q9BQD3 176 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 SELENOOQ9BVL4 669 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 GKN1Q9NS71 199 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 THG1LQ9NWX6 298 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 SMPD4Q9NXE4 827 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 MARCH2Q9P0N8 246 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 RASAL2Q9UJF2 1139 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 CPQQ9Y646 472 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 LEFTY2O00292 366 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 MDM4O15151 490 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 PRAMEF12O95522 483 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 ASGR2P07307 311 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 KRT3P12035 628 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 TCF3P15923 654 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 PSMC3P17980 439 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 FCARP24071 287 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 GBP1P32455 592 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 GSCP56915 257 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 TDGQ13569 410 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 SYPL2Q5VXT5 272 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 CC2D1AQ6P1N0 951 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 MSANTD2Q6P1R3 559 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 DNAJC24Q6P3W2 148 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 ARCQ7LC44 396 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 MFSD6LQ8IWD5 586 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 CCDC170Q8IYT3 715 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC44A3Q8N4M1 653 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 C3orf20Q8ND61 904 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 BPIFB1Q8TDL5 484 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 DEPDC1BQ8WUY9 529 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 PIWIL1Q96J94 861 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC2A13Q96QE2 648 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 UHRF1Q96T88 793 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 BAG1Q99933 345 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 RPP25Q9BUL9 199 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 TRMT61BQ9BVS5 477 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 PLA2G2FQ9BZM2 168 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 PARVAQ9NVD7 372 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 RRN3Q9NYV6 651 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 SFMBT1Q9UHJ3 866 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 TMEM59LQ9UK28 342 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 CCL26Q9Y258 94 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 SH3BP1Q9Y3L3 701 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 HBS1LQ9Y450 684 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 C5orf42Q9H799 3197 aa11.74□□□□□ -0.53
TRAPPC4-211ENST00000533012 ANKRD62A6NC57 917 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 SIGLEC16A6NMB1 481 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 ZNF263O14978 683 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 DAB1O75553 588 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 RRM1P23921 792 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 CYLC1P35663 651 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 MATKP42679 507 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 GPC5P78333 572 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 ZXDBP98169 803 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 SPA17Q15506 151 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 C10orf76Q5T2E6 689 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 DCUN1D2Q6PH85 259 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 VITQ6UXI7 678 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 DNAAF5Q86Y56 855 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 KIAA1958Q8N8K9 716 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 DQX1Q8TE96 717 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 RSPRY1Q96DX4 576 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 SERPINB11Q96P15 392 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 NECAB3Q96P71 396 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 LRRC3BQ96PB8 259 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 SMOC2Q9H3U7 446 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 MRPL47Q9HD33 250 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 METTL5Q9NRN9 209 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 TMEM51Q9NW97 253 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 CFAP97Q9P2B7 532 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 CNOT8Q9UFF9 292 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 LSM7Q9UK45 103 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 EPN1Q9Y6I3 576 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-211ENST00000533012 NOTCH4Q99466 2003 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 C2orf16Q68DN1 1984 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC9A3R1O14745 358 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 IPO7O95373 1038 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 TRUB2O95900 331 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 HMBSP08397 361 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 H2AFZP0C0S5 128 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 IRF1P10914 325 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 PDGFRAP16234 1089 aa11.72□□□□□ -0.53
TRAPPC4-211ENST00000533012 ABCB4P21439 1286 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms