RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SPATC1LQ9H0A9 340 aa8.73□□□□□ -1.01
CTNND1-227ENST00000530748 KIAA1683Q9H0B3 1180 aa8.73□□□□□ -1.01
CTNND1-227ENST00000530748 HEY2Q9UBP5 337 aa8.73□□□□□ -1.01
CTNND1-227ENST00000530748 PCDHB5Q9Y5E4 795 aa8.73□□□□□ -1.01
CTNND1-227ENST00000530748 ARHGEF28Q8N1W1 1705 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NQO1P15559 274 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 EPB42P16452 691 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SHMT1P34896 483 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 DEFA1P59665 94 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 DEFA3P59666 94 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 UBE3AQ05086 875 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NFYCQ13952 458 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TTC33Q6PID6 262 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 FAM83AQ86UY5 434 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SLC26A11Q86WA9 606 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ARHGEF19Q8IW93 802 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SMARCD1Q96GM5 515 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TBL1YQ9BQ87 522 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NAT9Q9BTE0 207 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CDC42EP4Q9H3Q1 356 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CTNNAL1Q9UBT7 734 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CAB39Q9Y376 341 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TRIM66O15016 1216 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CCDC159P0C7I6 412 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ACADMP11310 421 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ACADSP16219 412 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 GRK3P35626 688 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.72□□□□□ -1.013e-8■■■■□ 24.5
CTNND1-227ENST00000530748 C16orf72Q14CZ0 275 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CDKAL1Q5VV42 579 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 BHMTQ93088 406 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 FBXO44Q9H4M3 255 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 DPP7Q9UHL4 492 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 DNAJC16Q9Y2G8 782 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 DYRK3O43781 588 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 IFNA14P01570 189 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CCNG1P51959 295 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TGM3Q08188 693 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ELAVL2Q12926 359 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CDC16Q13042 620 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CCDC142Q17RM4 750 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TAS1R2Q8TE23 839 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 EFCAB1Q9HAE3 211 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 VTA1Q9NP79 307 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CPA4Q9UI42 421 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NEURL4Q96JN8 1562 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 hCG_2014768A0A024R1R8 64 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 KANSL1LA0AUZ9 987 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 MAGEA13PA6NCF6 341 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 HACD1B0YJ81 288 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 FAM47E-STBD1D6RA91 191 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 RNF103O00237 685 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NR5A2O00482 541 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 XPO1O14980 1071 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 RGL2O15211 777 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CYP2A7P20853 494 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CALB2P22676 271 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NAB1Q13506 487 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SLC30A10Q6XR72 485 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 LRRC6Q86X45 466 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NT5DC4Q86YG4 428 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 APLFQ8IW19 511 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SCUBE1Q8IWY4 988 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CPNE1Q99829 537 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SH3GL3Q99963 347 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 KCTD14Q9BQ13 255 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 PDCD2LQ9BRP1 358 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 HPS4Q9NQG7 708 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.72□□□□□ -1.013e-9■□□□□ 10.4
CTNND1-227ENST00000530748 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TBKBP1A7MCY6 615 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 RTN3O95197 1032 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CPSF4O95639 269 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ALDH2P05091 517 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ERVK-10P10266 1014 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TGFB3P10600 412 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 MSH3P20585 1137 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CCR1P32246 355 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 NR2C2P49116 596 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 PPIL2Q13356 520 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ZNF268Q14587 947 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 C2CD6Q53TS8 623 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 C10orf53Q8N6V4 93 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 MTFR1LQ9H019 292 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CAPN10Q9HC96 672 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 MAN1C1Q9NR34 630 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 TMEM51Q9NW97 253 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SOX13Q9UN79 622 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 CAPN6Q9Y6Q1 641 aa8.72□□□□□ -1.01
CTNND1-227ENST00000530748 MAP2P11137 1827 aaKnown RBP8.72□□□□□ -1.01
CTNND1-227ENST00000530748 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 LOC100653049A0A140TA62 436 aa8.71□□□□□ -1.01
CTNND1-227ENST00000530748 A0A1B0GW55 424 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms