RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 MAN1C1Q9NR34 630 aa15.04■□□□□ -0
TTC39A-216ENST00000530004 DDX56Q9NY93 547 aaKnown RBP15.04■□□□□ -0
TTC39A-216ENST00000530004 RAB21Q9UL25 225 aa15.04■□□□□ -0
TTC39A-216ENST00000530004 YIPF1Q9Y548 306 aa15.04■□□□□ -0
TTC39A-216ENST00000530004 HHLA1C9JL84 531 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 PI4K2BG5E9Z4 385 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 TRIM66O15016 1216 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 C8AP07357 584 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 KRT7P08729 469 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 DESP17661 470 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 ATF6P18850 670 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 PCK1P35558 622 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 GPR15P49685 360 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 VSNL1P62760 191 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 MRPS5P82675 430 aaKnown RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 RBM10P98175 930 aaKnown RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 SMTNL2Q2TAL5 461 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 ODF2Q5BJF6 829 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 RAB41Q5JT25 222 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 EFHC1Q5JVL4 640 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 RCOR2Q8IZ40 523 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 ZDHHC14Q8IZN3 488 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 DEFB123Q8N688 67 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 VN1R2Q8NFZ6 395 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 RNF25Q96BH1 459 aaPredicted RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 CDX2Q99626 313 aaPredicted RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 ULBP1Q9BZM6 244 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 IGFLR1Q9H665 355 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 ARGLU1Q9NWB6 273 aaPredicted RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 PCSK1NQ9UHG2 260 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 DMGDHQ9UI17 866 aaKnown RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 USP18Q9UMW8 372 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 INSL5Q9Y5Q6 135 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 ATG2AQ2TAZ0 1938 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 RAD51CO43502 376 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 HSF2BPO75031 334 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 TUBBP07437 444 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 RALAP11233 206 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 CETN2P41208 172 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 RPL10AP62906 217 aaKnown RBP15.03■□□□□ -0
TTC39A-216ENST00000530004 KCNT1Q5JUK3 1230 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 SDHAF4Q5VUM1 108 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 RTL10Q7L3V2 364 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 PRELID2Q8N945 189 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 FAM172AQ8WUF8 416 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 FAM149B1Q96BN6 582 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 SLITRK1Q96PX8 696 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 HERPUD2Q9BSE4 406 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 OSBPL8Q9BZF1 889 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 PNPLA8Q9NP80 782 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.03■□□□□ -0
TTC39A-216ENST00000530004 DPP7Q9UHL4 492 aa15.03■□□□□ -0
TTC39A-216ENST00000530004 ZMYND10O75800 440 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 FBXO21O94952 628 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 TRUB2O95900 331 aaKnown RBP15.02□□□□□ -0.01
TTC39A-216ENST00000530004 RARAP10276 462 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 PTPN9P43378 593 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 ALDH1A3P47895 512 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 TWF1Q12792 350 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 SIX1Q15475 284 aaPredicted RBP15.02□□□□□ -0.01
TTC39A-216ENST00000530004 PPP2R5EQ16537 467 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 RAB6CQ53S08 254 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 WDR93Q6P2C0 686 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 MFSD7Q6UXD7 560 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 ANKS1BQ7Z6G8 1248 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 EFHBQ8N7U6 833 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 MAIP1Q8WWC4 291 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 MYLIPQ8WY64 445 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 RAPGEF5Q92565 580 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 SPATA17Q96L03 361 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 GUCD1Q96NT3 240 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 HINFPQ9BQA5 517 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 HEMGNQ9BXL5 484 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 RAB6CQ9H0N0 254 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 SLITRK6Q9H5Y7 841 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 CNGB3Q9NQW8 809 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 STIM2Q9P246 746 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 AMACRQ9UHK6 382 aa15.02□□□□□ -0.01
TTC39A-216ENST00000530004 LRRD1A4D1F6 860 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 PRPSAP2O60256 369 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 PHF2O75151 1096 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 DAB1O75553 588 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 GLP2RO95838 553 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 GLI1P08151 1106 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 TFE3P19532 575 aaPredicted RBP15.01□□□□□ -0.01
TTC39A-216ENST00000530004 MCM3P25205 808 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 CLCN6P51797 869 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 DAOAP59103 153 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 YWHAZP63104 245 aaKnown RBP15.01□□□□□ -0.01
TTC39A-216ENST00000530004 BRD3Q15059 726 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 PPM1LQ5SGD2 360 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 ELMSAN1Q6PJG2 1045 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 TMEM184AQ6ZMB5 413 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 SPOCD1Q6ZMY3 1216 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 DEFB106AQ8N104 65 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 GPR152Q8TDT2 470 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 HSPH1Q92598 858 aa15.01□□□□□ -0.01
TTC39A-216ENST00000530004 CASP10Q92851 521 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms