RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 JAKMIP2Q96AA8 810 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 TMEM176AQ96HP8 235 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 RPGRIP1Q96KN7 1286 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CEP295NLQ96MC4 621 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 SEPT5Q99719 369 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 HNRNPABQ99729 332 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CRACR2AQ9BSW2 395 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ELOVL4Q9GZR5 314 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 DNAI2Q9GZS0 605 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 INTS2Q9H0H0 1204 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 VPS16Q9H269 839 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CD320Q9NPF0 282 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 MKS1Q9NXB0 559 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 TRMT1Q9NXH9 659 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 HMGXB4Q9UGU5 601 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 LIMA1Q9UHB6 759 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ADAMTS1Q9UHI8 967 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 PLAAQ9Y263 795 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 NR2E1Q9Y466 385 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 BRWD1Q9NSI6 2320 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 RNF225M0QZC1 329 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CLDN5O00501 218 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF197O14709 1029 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CLUHO75153 1309 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 MOSPD3O75425 235 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CSH1P0DML2 217 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CSH2P0DML3 217 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 LAMP2P13473 410 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 PCSK2P16519 638 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 HMGA1P17096 107 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 TRIM21P19474 475 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 FSHRP23945 695 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CCR2P41597 374 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 GPR15P49685 360 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 YWHAEP62258 255 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 VEPH1Q14D04 833 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 AP1ARQ63HQ0 302 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 DPY19L2P1Q6NXN4 242 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 PDZD4Q76G19 769 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ENOSF1Q7L5Y1 443 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 OTOP3Q7RTS5 596 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 APTXQ7Z2E3 356 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ITIH5Q86UX2 942 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 TMC8Q8IU68 726 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ARHGEF19Q8IW93 802 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 SCN4BQ8IWT1 228 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ZDHHC14Q8IZN3 488 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 FUKQ8N0W3 1084 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC4A11Q8NBS3 891 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 LEMD2Q8NC56 503 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ITFG1Q8TB96 612 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 GPR152Q8TDT2 470 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ATRIPQ8WXE1 791 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 FGF13Q92913 245 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 KAT5Q92993 513 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ACSF2Q96CM8 615 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CYFIP2Q96F07 1278 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 MYO19Q96H55 970 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 SPATA17Q96L03 361 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM81BQ96LP2 452 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 MYRFLQ96LU7 910 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 HEXIM2Q96MH2 286 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 KREMEN1Q96MU8 473 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 NECAB3Q96P71 396 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 KCNK16Q96T55 309 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 UHRF1Q96T88 793 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 C2orf49Q9BVC5 232 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 COL25A1Q9BXS0 654 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF518BQ9C0D4 1074 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CSNK1G1Q9HCP0 422 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 UBE2TQ9NPD8 197 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 COMMD8Q9NX08 183 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 TAB2Q9NYJ8 693 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 GCNT4Q9P109 453 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 KIAA1257Q9ULG3 409 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 CNTN6Q9UQ52 1028 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 N6AMT1Q9Y5N5 214 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 ZFP37Q9Y6Q3 630 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 TSC2P49815 1807 aa6.61□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC38A8A6NNN8 435 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 BECN2A8MW95 431 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 C2CD4DB7Z1M9 353 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 F8VP50 259 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 BOLA2-SMG1P6H3BVE0 249 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PDPK1O15530 556 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 BEST1O76090 585 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 FGF19O95750 216 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 F11P03951 625 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PAEPP09466 180 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 RBP3P10745 1247 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 IMPDH2P12268 514 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 MYL4P12829 197 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 ATP1A3P13637 1013 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 CCDC130P13994 396 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 PMLP29590 882 aa6.6□□□□□ -1.35
ATPAF1-209ENST00000529214 GBP2P32456 591 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms