RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PTPN4P29074 926 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 ADCYAP1R1P41586 468 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 ETV4P43268 484 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 PTDSS1P48651 473 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 NEK3P51956 506 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 PGGT1BP53609 377 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 PITX1P78337 314 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 MRPS5P82675 430 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 GRM1Q13255 1194 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 RCN1Q15293 331 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 TAZQ16635 292 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 HSF5Q4G112 596 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 RGS9BPQ6ZS82 235 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 NDUFAF2Q8N183 169 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 STK32AQ8WU08 396 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 MOCOSQ96EN8 888 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 LGMNQ99538 433 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SMARCAD1Q9H4L7 1026 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 BARX2Q9UMQ3 279 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 RGPD3A6NKT7 1758 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 RGPD4Q7Z3J3 1758 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 DLDP09622 509 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 ESRRAP11474 423 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CALB2P22676 271 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 IGFBP6P24592 240 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CYP2F1P24903 491 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 LMO2P25791 158 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SDC4P31431 198 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 HDAC4P56524 1084 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 R3HDM1Q15032 1099 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 PRKD1Q15139 912 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CCDC6Q16204 474 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CTU1Q7Z7A3 348 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 FAM131BQ86XD5 332 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 TREML1Q86YW5 311 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SPNS2Q8IVW8 549 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CCDC185Q8N715 623 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 EFCAB3Q8N7B9 438 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 FNIP1Q8TF40 1166 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 KHSRPQ92945 711 aaKnown RBP eCLIP7.73□□□□□ -1.179e-10■■■■□ 24.3
C11orf54-207ENST00000528288 MCUR1Q96AQ8 359 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 EBF4Q9BQW3 602 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 NT5C1AQ9BXI3 368 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 POPDC2Q9HBU9 364 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 WDR35Q9P2L0 1181 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 GJD2Q9UKL4 321 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SCN1AP35498 2009 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 WDR27A2RRH5 827 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 H3BRJ5 948 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 HBP1O60381 514 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 LGR5O75473 907 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 GNAZP19086 355 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SKIV2L2P42285 1042 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 UBAP2LQ14157 1087 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 RASA2Q15283 850 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SH3D19Q5HYK7 790 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 CCDC62Q6P9F0 684 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 KCNT2Q6UVM3 1135 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SH2D5Q6ZV89 423 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SLC26A11Q86WA9 606 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SPDL1Q96EA4 605 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 NAF1Q96HR8 494 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 RILPQ96NA2 401 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 EIF2AQ9BY44 585 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 VPS11Q9H270 941 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 TAS2R1Q9NYW7 299 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 TM9SF1O15321 606 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 GSC2O15499 205 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 USP12O75317 370 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 IL18RAPO95256 599 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 LGALS2P05162 132 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 STIP1P31948 543 aaKnown RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 TUBP50607 506 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 AQP5P55064 265 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 SOWAHAQ2M3V2 549 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 ACSBG2Q5FVE4 666 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 EP400NLQ6ZTU2 488 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 PLPPR4Q7Z2D5 763 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 NSL1Q96IY1 281 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 GBA2Q9HCG7 927 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-207ENST00000528288 WASF2Q9Y6W5 498 aa7.73□□□□□ -1.17
C11orf54-207ENST00000528288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.72□□□□□ -1.17
C11orf54-207ENST00000528288 HMX2A2RU54 273 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 SLC15A5A6NIM6 579 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 B2RBV5 119 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 RFPL1O75677 317 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 C1QAP02745 245 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 GOT1P17174 413 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 RPL10AP62906 217 aaKnown RBP7.72□□□□□ -1.17
C11orf54-207ENST00000528288 CDK16Q00536 496 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 PEX6Q13608 980 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 THOC5Q13769 683 aaKnown RBP7.72□□□□□ -1.17
C11orf54-207ENST00000528288 TFDP2Q14188 446 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 PARP6Q2NL67 630 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 PPM1JQ5JR12 505 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 TTC39BQ5VTQ0 682 aaPredicted RBP7.72□□□□□ -1.17
C11orf54-207ENST00000528288 C4orf50Q6ZRC1 276 aa7.72□□□□□ -1.17
C11orf54-207ENST00000528288 RSPH3Q86UC2 560 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms