RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SLC2A14Q8TDB8 520 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 ZNF516Q92618 1163 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 C7orf25Q9BPX7 421 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 SDCBP2Q9H190 292 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 SPHK2Q9NRA0 654 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 TMEM74BQ9NUR3 256 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 CGNQ9P2M7 1197 aaKnown RBP12.4□□□□□ -0.42
CAPN1-204ENST00000526468 CHORDC1Q9UHD1 332 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-204ENST00000526468 CYP8B1Q9UNU6 501 aa12.4□□□□□ -0.42
CAPN1-204ENST00000526468 SPEGQ15772 3267 aa12.4□□□□□ -0.43
CAPN1-204ENST00000526468 DSPP15924 2871 aaKnown RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 SYCE3A1L190 88 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 POLR2DO15514 142 aaKnown RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 ZBTB24O43167 697 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 CYP26A1O43174 497 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 HYAL3O43820 417 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 P4HA1P13674 534 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 ADORA2BP29275 332 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 HOXD12P35452 270 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 AFMP43652 599 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 MAP3K7CLP57077 242 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 SIM1P81133 766 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 KNOP1Q1ED39 458 aaKnown RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 PEAR1Q5VY43 1037 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 SLC23A3Q6PIS1 610 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 SLC36A4Q6YBV0 504 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 RABEPKQ7Z6M1 372 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 TMEM25Q86YD3 366 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 MIB1Q86YT6 1006 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 CHPFQ8IZ52 775 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 WBP2Q969T9 261 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 HSPA12BQ96MM6 686 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 VRTNQ9H8Y1 702 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 TLR8Q9NR97 1041 aaKnown RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 EXOC1Q9NV70 894 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 LSM7Q9UK45 103 aaKnown RBP12.39□□□□□ -0.43
CAPN1-204ENST00000526468 PILRBQ9UKJ0 227 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 PAXBP1Q9Y5B6 917 aa12.39□□□□□ -0.43
CAPN1-204ENST00000526468 TRIM24O15164 1050 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 CACNG3O60359 315 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 OPHN1O60890 802 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 VNN1O95497 513 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 ZDHHC11BP0C7U3 371 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 FAM200BP0CF97 657 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 TYRP14679 529 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 NDUFV2P19404 249 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 NTSR1P30989 418 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 NDST1P52848 882 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 AP3M2P53677 418 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-204ENST00000526468 CUL4BQ13620 913 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 DUOXA1Q1HG43 343 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 KIAA1324Q6UXG2 1013 aaKnown RBP12.38□□□□□ -0.43
CAPN1-204ENST00000526468 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 PAQR9Q6ZVX9 377 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 CEP57L1Q8IYX8 460 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 OR2I1PQ8NGU4 316 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 GATA6Q92908 595 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 BHMTQ93088 406 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 XPO6Q96QU8 1125 aaKnown RBP12.38□□□□□ -0.43
CAPN1-204ENST00000526468 SMOQ99835 787 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 TMEM121BQ9BXQ6 578 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-204ENST00000526468 FBXO44Q9H4M3 255 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■■■■■ 73.6
CAPN1-204ENST00000526468 COMMD8Q9NX08 183 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 OGFRQ9NZT2 677 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 WASF3Q9UPY6 502 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN1-204ENST00000526468 MYLKQ15746 1914 aa12.38□□□□□ -0.43
CAPN1-204ENST00000526468 A0A0A0MRY4 1105 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 IGHV1OR15-9A0A0B4J2B8 117 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 FAM92AA1XBS5 289 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 MDM4O15151 490 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 CTIFO43310 598 aaKnown RBP12.37□□□□□ -0.43
CAPN1-204ENST00000526468 BEST1O76090 585 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 ASPAP45381 313 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 ME1P48163 572 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 ZNF33AQ06730 810 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 SDE2Q6IQ49 451 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 TOGARAM2Q6ZUX3 1019 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 MINDY1Q8N5J2 469 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 KIAA0895Q8NCT3 520 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 CEP76Q8TAP6 659 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms