RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SKIP12755 728 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 HSDL1Q3SXM5 330 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 CCDC14Q49A88 953 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 MROH9Q5TGP6 573 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 RNF220Q5VTB9 566 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 OR6B2Q6IFH4 312 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 SCYL2Q6P3W7 929 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 ZNF534Q76KX8 674 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 SMC1BQ8NDV3 1235 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 PANX3Q96QZ0 392 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 EBF4Q9BQW3 602 aa17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 MYO18AQ92614 2054 aaKnown RBP17.18■□□□□ 0.34
PCDHGA11-202ENST00000518882 TRDMT1O14717 391 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 ZBED1O96006 694 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 ALDH18A1P54886 795 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 ATG16L1Q676U5 607 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 SHKBP1Q8TBC3 707 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 CCDC106Q9BWC9 280 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 KLC2Q9H0B6 622 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 MKS1Q9NXB0 559 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 HBS1LQ9Y450 684 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 PRR5-ARHGAP8B1AHC4 643 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 SNNO75324 88 aaPredicted RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 METTL18O95568 372 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 EDNRBP24530 442 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 BCAR1P56945 870 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 ARHGAP8P85298 464 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 UBAP2LQ14157 1087 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 METTL7BQ6UX53 244 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 RIPOR1Q6ZS17 1223 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 ILDR2Q71H61 639 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 SCUBE1Q8IWY4 988 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 NDUFAF2Q8N183 169 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 ARHGAP24Q8N264 748 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 CHST13Q8NET6 341 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 IFT43Q96FT9 208 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 WWP1Q9H0M0 922 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 C2orf40Q9H1Z8 148 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 PCDH18Q9HCL0 1135 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 SPATS2LQ9NUQ6 558 aaKnown RBP17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 TAGLN3Q9UI15 199 aa17.17■□□□□ 0.34
PCDHGA11-202ENST00000518882 BCLAF3A2AJT9 711 aaKnown RBP17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 APOL1O14791 398 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 TM7SF2O76062 418 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 PFKMP08237 780 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 GRIA1P42261 906 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 MAGEA3P43357 314 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 MAGEA6P43360 314 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 GMPSP49915 693 aaPredicted RBP17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 MBTD1Q05BQ5 628 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 TRIM42Q8IWZ5 723 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 ULK2Q8IYT8 1036 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 ADGRF2Q8IZF7 708 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 CCDC33Q8N5R6 958 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 TEKT4Q8WW24 435 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 SIGLEC10Q96LC7 697 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 ZNF184Q99676 751 aaPredicted RBP17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 THTPAQ9BU02 230 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 NGRNQ9NPE2 291 aaKnown RBP17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 SLC7A8Q9UHI5 535 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 MAD1L1Q9Y6D9 718 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 PCNTO95613 3336 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 FAM159BA6NKW6 160 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 MAP3K7O43318 606 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 SMIM24O75264 130 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 IL18RAPO95256 599 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 FESP07332 822 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 BPGMP07738 259 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 VDRP11473 427 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 RGS7P49802 495 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 NDST1P52848 882 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 IRX4P78413 519 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 FOXB2Q5VYV0 432 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 SLC9A4Q6AI14 798 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 C12orf29Q8N999 325 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 PPFIBP2Q8ND30 876 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 FAM167AQ96KS9 214 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 TSC22D3Q99576 134 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 SNRNP25Q9BV90 132 aaKnown RBP17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 FRMD8Q9BZ67 464 aaPredicted RBP17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 TSPAN16Q9UKR8 245 aa17.16■□□□□ 0.34
PCDHGA11-202ENST00000518882 F8W8V4 182 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 MCM3APO60318 1980 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 KRT38O76015 456 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 GSRP00390 522 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 STAG3L1P0CL83 205 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 ANPEPP15144 967 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 TGM2P21980 687 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 CLCN3P51790 818 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 NET1Q7Z628 596 aaPredicted RBP17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 CRLF3Q8IUI8 442 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 UNC5BQ8IZJ1 945 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 GATA6Q92908 595 aa17.15■□□□□ 0.34
PCDHGA11-202ENST00000518882 ZNF778Q96MU6 729 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms