RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SLC8A3P57103 927 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 GRSF1Q12849 480 aaKnown RBP eCLIP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 DRAP1Q14919 205 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 DGKKQ5KSL6 1271 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 TPGS1Q6ZTW0 290 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 ENOSF1Q7L5Y1 443 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 SLC47A2Q86VL8 602 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 PASD1Q8IV76 773 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 PHTF2Q8N3S3 785 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 PIWIL1Q96J94 861 aaKnown RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 NAA15Q9BXJ9 866 aaKnown RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 ZDHHC4Q9NPG8 344 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 PLCB1Q9NQ66 1216 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 FBXO4Q9UKT5 387 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 PROB1E7EW31 1015 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-219ENST00000518824 FYNP06241 537 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 ATP1A3P13637 1013 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 ZNF18P17022 549 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 CXCL12P48061 93 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 COPB1P53618 953 aaKnown RBP13.94□□□□□ -0.18
VEGFA-219ENST00000518824 SEC13P55735 322 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 MYL5Q02045 173 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 KDSRQ06136 332 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 NR1H3Q13133 447 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 STILQ15468 1287 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 ANO6Q4KMQ2 910 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 EMC10Q5UCC4 262 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 BTBD8Q5XKL5 378 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 FMNL3Q8IVF7 1028 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 SCUBE3Q8IX30 993 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 ETFBKMTQ8IXQ9 262 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 KIAA1958Q8N8K9 716 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 NELL1Q92832 810 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 BHMTQ93088 406 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 FUCA2Q9BTY2 467 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 SLC4A5Q9BY07 1137 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 GANQ9H2C0 597 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 ST7Q9NRC1 585 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 TBC1D14Q9P2M4 693 aa13.94□□□□□ -0.18
VEGFA-219ENST00000518824 E5RJQ4 531 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 PAPSS1O43252 624 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 DRD1P21728 446 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 CORO1AP31146 461 aaKnown RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 PXNP49023 591 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 SRSF5Q13243 272 aaKnown RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 RAPGEF1Q13905 1077 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 TAF5Q15542 800 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 ANO4Q32M45 955 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 MAMSTRQ6ZN01 415 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 FAM71AQ8IYT1 594 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 SCML4Q8N228 414 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 RPLP0P6Q8NHW5 317 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 HSFY1Q96LI6 401 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 PLK2Q9NYY3 685 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
VEGFA-219ENST00000518824 HCN2Q9UL51 889 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 SIK3Q9Y2K2 1263 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 VPS13AQ96RL7 3174 aa13.93□□□□□ -0.18
VEGFA-219ENST00000518824 EML5Q05BV3 1969 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 PRR23AA6NEV1 266 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 CHURC1-FNTBB4DL54 471 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 NEDD8-MDP1E9PL57 170 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 HOXC11O43248 304 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-219ENST00000518824 TULP3O75386 442 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 ADH1CP00326 375 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 LTFP02788 710 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.18
VEGFA-219ENST00000518824 UCHL3P15374 230 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 FNTBP49356 437 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 CCR3P51677 355 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 PITX1P78337 314 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-219ENST00000518824 AMPD2Q01433 879 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 GAD2Q05329 585 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 ZNF528Q3MIS6 628 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 C2orf27AQ580R0 203 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 TOGARAM2Q6ZUX3 1019 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 SYNPOQ8N3V7 929 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 ZBTB44Q8NCP5 570 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 C1orf131Q8NDD1 294 aaKnown RBP13.92□□□□□ -0.18
VEGFA-219ENST00000518824 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 CPXM1Q96SM3 734 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 LIMA1Q9UHB6 759 aaKnown RBP13.92□□□□□ -0.18
VEGFA-219ENST00000518824 LSM7Q9UK45 103 aaKnown RBP13.92□□□□□ -0.18
VEGFA-219ENST00000518824 CLEC4EQ9ULY5 219 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms