RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SLC3A2P08195 630 aaKnown RBP1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 RPS6KB1P23443 525 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 UQCRC1P31930 480 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 GATMP50440 423 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 MAP2K6P52564 334 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 DSC1Q08554 894 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 CCDC15Q0P6D6 951 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 TRAF2Q12933 501 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 MRGPRG-AS1Q2M3A8 158 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 PGS1Q32NB8 556 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 NPNTQ6UXI9 565 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 ZNF783Q6ZMS7 281 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 USP45Q70EL2 814 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 RTL10Q7L3V2 364 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 MPP5Q8N3R9 675 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 CTHRC1Q96CG8 243 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 EDC3Q96F86 508 aaKnown RBP1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 TM2D2Q9BX73 214 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 TRIM5Q9C035 493 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 SERPINB13Q9UIV8 391 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 FZD4Q9ULV1 537 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 MED16Q9Y2X0 877 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 PCDHGA9Q9Y5G4 932 aaKnown RBP1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 PCDHGA8Q9Y5G5 932 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 PCDHGA7Q9Y5G6 932 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 PCDHGA6Q9Y5G7 932 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 PCDHGA3Q9Y5H0 932 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 SIRT4Q9Y6E7 314 aaPredicted RBP1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 NOTCH3Q9UM47 2321 aa1.9□□□□□ -2.11
RNU6-561P-201ENST00000516222 TRBV5-3A0A0A0MS03 114 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 OR6C75A6NL08 312 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 A8MVJ9 347 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 PODXLO00592 558 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 CPA1P15085 419 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 ADRA1DP25100 572 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 HSD3B2P26439 372 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 KLRC1P26715 233 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 RFX2P48378 723 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 FMO1Q01740 532 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 ROR2Q01974 943 aaKnown RBP1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 ITKQ08881 620 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 RAB32Q13637 225 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 PTCHD3Q3KNS1 767 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 ZIK1Q3SY52 487 aaPredicted RBP1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 ANO6Q4KMQ2 910 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 CACHD1Q5VU97 1274 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 RBM44Q6ZP01 1051 aaKnown RBP1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 TRILQ7L0X0 811 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 OR6B3Q8NGW1 331 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 DNAJB14Q8TBM8 379 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 TMEM174Q8WUU8 243 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 RAPGEF4Q8WZA2 1011 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 DUX5Q96PT3 197 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 PPP1R9BQ96SB3 815 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 EPYCQ99645 322 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 THSD1Q9NS62 852 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 DNAJB11Q9UBS4 358 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 STEAP1Q9UHE8 339 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 CPA4Q9UI42 421 aa1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 TRIP12Q14669 1992 aaPredicted RBP1.89□□□□□ -2.11
RNU6-561P-201ENST00000516222 A0A087WYN8 130 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 KIR2DS5A0A0G2JLQ3 304 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 SLC22A23A1A5C7 686 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 ANTXRLA6NF34 631 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 KIR2DS3K7RE56 304 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 SRGAP2O75044 1071 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 KRT36O76013 467 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 VIL1P09327 827 aaKnown RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 HOXD3P31249 432 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 HOXA11P31270 313 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 PGDP52209 483 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 ERVFC1-1P60608 527 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 WDR5P61964 334 aaKnown RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 GPC5P78333 572 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 NKX6-1P78426 367 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 GAD2Q05329 585 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 FGL2Q14314 439 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 PCBP2Q15366 365 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 SF3B4Q15427 424 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 SHBQ15464 509 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 CCDC6Q16204 474 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 CNGA3Q16281 694 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 PTPN21Q16825 1174 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 ABCB5Q2M3G0 1257 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 GLE1Q53GS7 698 aaKnown RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 INO80DQ53TQ3 878 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 KIAA1755Q5JYT7 1200 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 HIST2H2BCQ6DN03 193 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 ISM2Q6H9L7 571 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 DSTYKQ6XUX3 929 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 RBM23Q86U06 439 aaKnown RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 CBARPQ8N350 705 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 PRR18Q8N4B5 295 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 DBF4BQ8NFT6 615 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 WIPF2Q8TF74 440 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 ZNF668Q96K58 619 aaPredicted RBP1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 PIMREGQ9BSJ6 248 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 RETREG1Q9H6L5 497 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 ZNF556Q9HAH1 456 aa1.88□□□□□ -2.11
RNU6-561P-201ENST00000516222 TCF7L2Q9NQB0 619 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms