RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 PABPC3Q9H361 631 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 TAF1DQ9H5J8 278 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 SAYSD1Q9NPB0 183 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 FSCN3Q9NQT6 498 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 PRDM8Q9NQV8 689 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 KIF17Q9P2E2 1029 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 RAPGEFL1Q9UHV5 662 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 CCNL1Q9UK58 526 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 RIMKLBQ9ULI2 386 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 REXO2Q9Y3B8 237 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 KIAA0556O60303 1618 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 BRD4O60885 1362 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 USP47Q96K76 1375 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 BLMP54132 1417 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 KIAA1107Q9UPP5 1409 aa3.61□□□□□ -1.83
CALCOCO2-216ENST00000509784 SHANK2Q9UPX8 1470 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CLASP1Q7Z460 1538 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 ZNF608Q9ULD9 1512 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 TRPM1Q7Z4N2 1603 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 RAPGEF6Q8TEU7 1601 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 RNF17Q9BXT8 1623 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PIPSLA2A3N6 862 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 VWC2LB2RUY7 222 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PSMD9O00233 223 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 EIF3FO00303 357 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PEX1O43933 1283 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PPP6R2O75170 966 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 WDHD1O75717 1129 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PYGLP06737 847 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CD19P15391 556 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 DRD1P21728 446 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 HTR7P34969 479 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PTGS2P35354 604 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PBX1P40424 430 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 PDE1AP54750 535 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 RRP1P56182 461 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 POU5F1BQ06416 359 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CUL4BQ13620 913 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 TMEM196Q5HYL7 178 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CYP26C1Q6V0L0 522 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 DPY19L3Q6ZPD9 716 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 FTSJ3Q8IY81 847 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CSGALNACT1Q8TDX6 532 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 AFG1LQ8WV93 481 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 WDR60Q8WVS4 1066 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 SOCS4Q8WXH5 440 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 TFAP2BQ92481 460 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 LENG9Q96B70 501 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 UBXN10Q96LJ8 280 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 Q96MF0 132 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 TRAPPC9Q96Q05 1148 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 WDR24Q96S15 920 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 GPR20Q99678 358 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 EIF2AK1Q9BQI3 630 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 AIFM2Q9BRQ8 373 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 MLST8Q9BVC4 326 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 C1QTNF3Q9BXJ4 246 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 BRD8Q9H0E9 1235 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 SERHL2Q9H4I8 314 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 ELAC1Q9H777 363 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 KLC4Q9NSK0 619 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 KCTD5Q9NXV2 234 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 NKX1-2Q9UD57 310 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 STEAP1Q9UHE8 339 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CDC42BPAQ5VT25 1732 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 ADGRA2Q96PE1 1338 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 COL15A1P39059 1388 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 KIF15Q9NS87 1388 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 CAMSAP2Q08AD1 1489 aa3.6□□□□□ -1.83
CALCOCO2-216ENST00000509784 RRN3P2A6NIE6 340 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 B9A039 149 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 DHHO43323 396 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 PROM1O43490 865 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 WDR47O94967 919 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 CER1O95813 267 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 AGR2O95994 175 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 PEX11BO96011 259 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 IL6RP08887 468 aaPredicted RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 TMEM225BP0DP42 221 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 NR2F6P10588 404 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 EGR2P11161 476 aaPredicted RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 CST5P28325 142 aaPredicted RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 ADD2P35612 726 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 GSTM5P46439 218 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 PRKAA2P54646 552 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 EIF4A1P60842 406 aaKnown RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 FOXE3Q13461 319 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 BFSP2Q13515 415 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 TUBA3CQ13748 450 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 CSHL1Q14406 222 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 CLCA4Q14CN2 919 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 ACOX1Q15067 660 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 RPS6KA2Q15349 733 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 ADCK5Q3MIX3 580 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 LY6G5CQ5SRR4 150 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 ZNF618Q5T7W0 954 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 TEDDM1Q5T9Z0 273 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 ABHD17BQ5VST6 288 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 CCDC70Q6NSX1 233 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 NFRKBQ6P4R8 1299 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms