RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 VILLO15195 856 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 HIP1RO75146 1068 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 SEMA4FO95754 770 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 HMGB1P09429 215 aaKnown RBP7.68□□□□□ -1.18
VCAN-207ENST00000507162 TYRP14679 529 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 ANXA13P27216 316 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 PDIA3P30101 505 aaKnown RBP7.68□□□□□ -1.18
VCAN-207ENST00000507162 ARRB1P49407 418 aaPredicted RBP7.68□□□□□ -1.18
VCAN-207ENST00000507162 DGKGP49619 791 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 BCAT1P54687 386 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 DAB2P98082 770 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 MCL1Q07820 350 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 TMEM132DQ14C87 1099 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
VCAN-207ENST00000507162 DENND5BQ6ZUT9 1274 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 SGF29Q96ES7 293 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 SLC6A18Q96N87 628 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 DEPDC7Q96QD5 511 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 SEMA3CQ99985 751 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 ACBD6Q9BR61 282 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 ABCG4Q9H172 646 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 SLC25A18Q9H1K4 315 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 BHMT2Q9H2M3 363 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 AASDHPPTQ9NRN7 309 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 RYDENQ9NUL5 291 aaKnown RBP7.68□□□□□ -1.18
VCAN-207ENST00000507162 DPP3Q9NY33 737 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 MAGEC2Q9UBF1 373 aaPredicted RBP7.68□□□□□ -1.18
VCAN-207ENST00000507162 SATB2Q9UPW6 733 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 OBSL1O75147 1896 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 F8P00451 2351 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 ANAPC1Q9H1A4 1944 aa7.68□□□□□ -1.18
VCAN-207ENST00000507162 OPA1O60313 960 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 TSPAN3O60637 253 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 OAS1P00973 400 aaKnown RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 IGLV3-19P01714 112 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 EPHX1P07099 455 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 CENPBP07199 599 aaPredicted RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 CISD3P0C7P0 127 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 BDNFP23560 247 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 ACP1P24666 158 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 PPP3CCP48454 512 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 CDH8P55286 799 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 RACK1P63244 317 aaKnown RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 TAF10Q12962 218 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 CLN3Q13286 438 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 KRT32Q14532 448 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 TBR1Q16650 682 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 TDRD10Q5VZ19 366 aaKnown RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 CD302Q8IX05 232 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 PDCL2Q8N4E4 241 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 ERMNQ8TAM6 284 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 GANCQ8TET4 914 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 LEO1Q8WVC0 666 aaPredicted RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 WBP2Q969T9 261 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 SLC46A1Q96NT5 459 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 TSPAN18Q96SJ8 248 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 BTBD1Q9H0C5 482 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 GZF1Q9H116 711 aaPredicted RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 LHX5Q9H2C1 402 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 GDF3Q9NR23 364 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 GJB4Q9NTQ9 266 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 PLK2Q9NYY3 685 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 WDR35Q9P2L0 1181 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 THAP10Q9P2Z0 257 aaPredicted RBP7.67□□□□□ -1.18
VCAN-207ENST00000507162 LRWD1Q9UFC0 647 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 SCN1AP35498 2009 aa7.67□□□□□ -1.18
VCAN-207ENST00000507162 ANK1P16157 1881 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 MTORP42345 2549 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 YKT6O15498 198 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 CYP26A1O43174 497 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 COCHO43405 550 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 HCRTO43612 131 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 SIGLEC6O43699 453 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 CACNG3O60359 315 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 NEMFO60524 1076 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 HUS1O60921 280 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 DTNBO60941 627 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 ATP2C2O75185 946 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 OLFM2O95897 454 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 WNT1P04628 370 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 ITGB2P05107 769 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 XBP1P17861 261 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 RPA1P27694 616 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 TNFRSF8P28908 595 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 EPHA8P29322 1005 aaPredicted RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 CCT6AP40227 531 aaKnown RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 MAGEA11P43364 429 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 COPAP53621 1224 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 CYP27A1Q02318 531 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 GRIN1Q05586 938 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 SRSF6Q13247 344 aaKnown RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 NR5A1Q13285 461 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 KYAT1Q16773 422 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 PROX2Q3B8N5 592 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 SV2CQ496J9 727 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 CFAP221Q4G0U5 840 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 C4orf50Q6ZRC1 276 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms