RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 OLA1Q9NTK5 396 aaKnown RBP16.29■□□□□ 0.2
MED28-204ENST00000506409 FANCMQ8IYD8 2048 aa16.29■□□□□ 0.2
MED28-204ENST00000506409 YJEFN3A6XGL0 299 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 BECN2A8MW95 431 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.28■□□□□ 0.2
MED28-204ENST00000506409 CHURC1-FNTBB4DL54 471 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 E7ENQ6 273 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 PIK3R2O00459 728 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 HOXC11O43248 304 aaPredicted RBP16.28■□□□□ 0.2
MED28-204ENST00000506409 LMNAP02545 664 aaKnown RBP16.28■□□□□ 0.2
MED28-204ENST00000506409 SLC6A11P48066 632 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 DAOAP59103 153 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 STX1AQ16623 288 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 BSPRYQ5W0U4 402 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 Q6ZNB5 142 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 C11orf57Q6ZUT1 292 aaPredicted RBP16.28■□□□□ 0.2
MED28-204ENST00000506409 RPLP0P6Q8NHW5 317 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 RNF139Q8WU17 664 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 ZNF606Q8WXB4 792 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 SHC3Q92529 594 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 EDEM1Q92611 657 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 ACP6Q9NPH0 428 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 ST7Q9NRC1 585 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 ABCC13Q9NSE7 274 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 DNAJC12Q9UKB3 198 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 MYOFQ9NZM1 2061 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 USP34Q70CQ2 3546 aa16.28■□□□□ 0.2
MED28-204ENST00000506409 ATG2BQ96BY7 2078 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 SLC12A8A0AV02 714 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 K7ESF4 209 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 GABBR2O75899 941 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 FBXO21O94952 628 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 KAT7O95251 611 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 APODP05090 189 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 HMBSP08397 361 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 CORO1AP31146 461 aaKnown RBP16.27■□□□□ 0.2
MED28-204ENST00000506409 GPD2P43304 727 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 MEA1Q16626 185 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 DENND1BQ6P3S1 775 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 TPGS1Q6ZTW0 290 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 NAT16Q8N8M0 369 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 IRGQQ8WZA9 623 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 BBS2Q9BXC9 721 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 DCLK3Q9C098 648 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 MIS12Q9H081 205 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 TAB2Q9NYJ8 693 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 AJAP1Q9UKB5 411 aaPredicted RBP16.27■□□□□ 0.2
MED28-204ENST00000506409 SLC8A2Q9UPR5 921 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 ZNF510Q9Y2H8 683 aa16.27■□□□□ 0.2
MED28-204ENST00000506409 NEDD8-MDP1E9PL57 170 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 K7EQS6 105 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 LILRB5O75023 590 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 TULP3O75386 442 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 KLKB1P03952 638 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 GRIA2P42262 883 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 ACADSBP45954 432 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 SEC13P55735 322 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 KDSRQ06136 332 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 MESP2Q0VG99 397 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 HEATR6Q6AI08 1181 aaKnown RBP16.26■□□□□ 0.19
MED28-204ENST00000506409 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 FMNL3Q8IVF7 1028 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 ETFBKMTQ8IXQ9 262 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 GOLGA1Q92805 767 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 ACDQ96AP0 544 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 DEC1Q9P2X7 70 aa16.26■□□□□ 0.19
MED28-204ENST00000506409 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
MED28-204ENST00000506409 SART1O43290 800 aaKnown RBP16.25■□□□□ 0.19
MED28-204ENST00000506409 LTFP02788 710 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 TPM2P07951 284 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 TYRP14679 529 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 HOXA6P31267 233 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 RPL34P49207 117 aaKnown RBP16.25■□□□□ 0.19
MED28-204ENST00000506409 FNTBP49356 437 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 MYL5Q02045 173 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 PTK2Q05397 1052 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 DMWDQ09019 674 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 KCNMA1Q12791 1236 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 RAPGEF1Q13905 1077 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 KRT31Q15323 416 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 PREPLQ4J6C6 727 aaPredicted RBP16.25■□□□□ 0.19
MED28-204ENST00000506409 C2orf27AQ580R0 203 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 SYT13Q7L8C5 426 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 LONP2Q86WA8 852 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 DENND1CQ8IV53 801 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 SFTPA1Q8IWL2 248 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 PHTF2Q8N3S3 785 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 USP33Q8TEY7 942 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 CLEC4CQ8WTT0 213 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 PLD4Q96BZ4 506 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 XPO6Q96QU8 1125 aaKnown RBP16.25■□□□□ 0.19
MED28-204ENST00000506409 MARK1Q9P0L2 795 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 SFMBT1Q9UHJ3 866 aa16.25■□□□□ 0.19
MED28-204ENST00000506409 AGO1Q9UL18 857 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms