RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 LENG8Q96PV6 779 aaPredicted RBP7.22□□□□□ -1.25
NEDD4-203ENST00000502612 NKX1-2Q9UD57 310 aaPredicted RBP7.22□□□□□ -1.25
NEDD4-203ENST00000502612 DAPP1Q9UN19 280 aa7.22□□□□□ -1.25
NEDD4-203ENST00000502612 SH2B3Q9UQQ2 575 aa7.22□□□□□ -1.25
NEDD4-203ENST00000502612 CEP164Q9UPV0 1460 aa7.22□□□□□ -1.25
NEDD4-203ENST00000502612 TOP2BQ02880 1626 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 KIF28PB7ZC32 967 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 B9A039 149 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 H0YIZ8 118 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 M0QZQ0 153 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 CES2O00748 559 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 PDE8BO95263 885 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 ONECUT2O95948 504 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 ADH4P08319 380 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 ALADP13716 330 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 CREB1P16220 341 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 KRT4P19013 534 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 TNFRSF1AP19438 455 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 FPR3P25089 353 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 BFSP2Q13515 415 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 PUM1Q14671 1186 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEDD4-203ENST00000502612 LAIR1Q6GTX8 287 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 USP51Q70EK9 711 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 CCDC117Q8IWD4 279 aaPredicted RBP7.21□□□□□ -1.26
NEDD4-203ENST00000502612 NRSN1Q8IZ57 195 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 Q8N1X5 172 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 RUBCNQ92622 972 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 TRIM63Q969Q1 353 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 MECRQ9BV79 373 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 DUSP22Q9NRW4 184 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 FOXJ2Q9P0K8 574 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 LRIT1Q9P2V4 623 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 PCDHB7Q9Y5E2 793 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 NCANO14594 1321 aa7.21□□□□□ -1.26
NEDD4-203ENST00000502612 M0QYT0 321 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 PRRG2O14669 202 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 KIAA0355O15063 1070 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 NPHP1O15259 732 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 PEPDP12955 493 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 PAX3P23760 479 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 GRIA3P42263 894 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 PPFIA1Q13136 1202 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 HECTD2Q5U5R9 776 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 FAM90A2PQ658T7 463 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 P3H2Q8IVL5 708 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 CSGALNACT1Q8TDX6 532 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 SLC22A17Q8WUG5 538 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 NEU4Q8WWR8 484 aaPredicted RBP7.2□□□□□ -1.26
NEDD4-203ENST00000502612 GCC1Q96CN9 775 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 COQ10AQ96MF6 247 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 NUDT22Q9BRQ3 303 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 DDX23Q9BUQ8 820 aaKnown RBP7.2□□□□□ -1.26
NEDD4-203ENST00000502612 VPS16Q9H269 839 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 SAP30LQ9HAJ7 183 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 TRIM36Q9NQ86 728 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 SERTAD4Q9NUC0 356 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 RRN3Q9NYV6 651 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 CNTN6Q9UQ52 1028 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
NEDD4-203ENST00000502612 SOGA1O94964 1423 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 A8MVJ9 347 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 CD19P15391 556 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 AVPR1BP47901 424 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 CUL4BQ13620 913 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 CSHL1Q14406 222 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 ST3GAL2Q16842 350 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 HSP90AB4PQ58FF6 505 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 L1TD1Q5T7N2 865 aaKnown RBP7.19□□□□□ -1.26
NEDD4-203ENST00000502612 CCDC144NLQ6NUI1 221 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 RAB11FIP4Q86YS3 637 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 MACROD1Q9BQ69 325 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 SEPSECSQ9HD40 501 aaKnown RBP7.19□□□□□ -1.26
NEDD4-203ENST00000502612 FEM1BQ9UK73 627 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 SYNJ1O43426 1573 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 BIVM-ERCC5R4GMW8 1640 aa7.19□□□□□ -1.26
NEDD4-203ENST00000502612 H0Y3Z8 333 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 CTIFO43310 598 aaKnown RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 TTLL1O95922 423 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 PRKCBP05771 671 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 CST5P28325 142 aaPredicted RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 GSTM5P46439 218 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 CCT5P48643 541 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 DIO1P49895 249 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 ARL4CP56559 192 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 TRIM60Q495X7 471 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 ATPAF1Q5TC12 328 aaPredicted RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 PTCHD4Q6ZW05 846 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 PARS2Q7L3T8 475 aaKnown RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 CLASRPQ8N2M8 674 aaKnown RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 SIRT6Q8N6T7 355 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 RP9Q8TA86 221 aaKnown RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 PDLIM2Q96JY6 352 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 TRAPPC9Q96Q05 1148 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 ELAC1Q9H777 363 aaKnown RBP7.18□□□□□ -1.26
NEDD4-203ENST00000502612 HS3ST3A1Q9Y663 406 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 KIF21BO75037 1637 aa7.18□□□□□ -1.26
NEDD4-203ENST00000502612 EIF3FO00303 357 aaPredicted RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 IRAK2O43187 625 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 PRAMEF2O60811 474 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 FAM155BO75949 473 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms