RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 EXOC3L4Q17RC7 722 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 BTBD8Q5XKL5 378 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 PMF1Q6P1K2 205 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 FAM114A1Q8IWE2 563 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 ETFBKMTQ8IXQ9 262 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 NAT16Q8N8M0 369 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 CCDC26Q8TAB7 109 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 USP33Q8TEY7 942 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 SLC35F5Q8WV83 523 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 HHIPQ96QV1 700 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 ARHGEF4Q9NR80 690 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 MARCH2Q9P0N8 246 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 GTPBP10A4D1E9 387 aaKnown RBP19.28■□□□□ 0.68
HOXD11-202ENST00000498438 HMBSP08397 361 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 PXNP49023 591 aaPredicted RBP19.28■□□□□ 0.68
HOXD11-202ENST00000498438 MFAP3P55082 362 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 COG7P83436 770 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 SRSF5Q13243 272 aaKnown RBP19.28■□□□□ 0.68
HOXD11-202ENST00000498438 MAN2A1Q16706 1144 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 C2orf27AQ580R0 203 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 HSP90AA4PQ58FG1 418 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 TPGS1Q6ZTW0 290 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 ENOSF1Q7L5Y1 443 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 SYT13Q7L8C5 426 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 WDR5BQ86VZ2 330 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 PHTF2Q8N3S3 785 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 RUBCNQ92622 972 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 CNGB3Q9NQW8 809 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 APEX2Q9UBZ4 518 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 STRIP2Q9ULQ0 834 aa19.28■□□□□ 0.68
HOXD11-202ENST00000498438 EML5Q05BV3 1969 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 YJEFN3A6XGL0 299 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 E7ENQ6 273 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 NEDD8-MDP1E9PL57 170 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 GOLGA6L22H0YM25 854 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 PIK3R2O00459 728 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 HRO43593 1189 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 TULP3O75386 442 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 GABBR2O75899 941 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 PON1P27169 355 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 GRIA2P42262 883 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 DAOAP59103 153 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 DMC1Q14565 340 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 PRR23BQ6ZRT6 265 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 SCML4Q8N228 414 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 EDEM1Q92611 657 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 FAM81BQ96LP2 452 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 BBS2Q9BXC9 721 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 OLA1Q9NTK5 396 aaKnown RBP19.27■□□□□ 0.68
HOXD11-202ENST00000498438 MARK1Q9P0L2 795 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 NCDNQ9UBB6 729 aa19.27■□□□□ 0.68
HOXD11-202ENST00000498438 SPTBN4Q9H254 2564 aa19.27■□□□□ 0.67
HOXD11-202ENST00000498438 MYO18AQ92614 2054 aaKnown RBP19.26■□□□□ 0.67
HOXD11-202ENST00000498438 SLC12A8A0AV02 714 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 KLKB1P03952 638 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 CHRM1P11229 460 aaPredicted RBP19.26■□□□□ 0.67
HOXD11-202ENST00000498438 PRKCSHP14314 528 aaPredicted RBP19.26■□□□□ 0.67
HOXD11-202ENST00000498438 CORO1AP31146 461 aaKnown RBP19.26■□□□□ 0.67
HOXD11-202ENST00000498438 LPAL2Q16609 132 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 BSPRYQ5W0U4 402 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 RBM43Q6ZSC3 357 aaKnown RBP19.26■□□□□ 0.67
HOXD11-202ENST00000498438 DCLK2Q8N568 766 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 CAMKK1Q8N5S9 505 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 ACP6Q9NPH0 428 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 DEC1Q9P2X7 70 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 RAB23Q9ULC3 237 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 ZNF510Q9Y2H8 683 aa19.26■□□□□ 0.67
HOXD11-202ENST00000498438 SPAG17Q6Q759 2223 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 A0A0A0MRY4 1105 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 BECN2A8MW95 431 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 TRIM24O15164 1050 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 CACNG3O60359 315 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 LETM1O95202 739 aaPredicted RBP19.25■□□□□ 0.67
HOXD11-202ENST00000498438 TYRP14679 529 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 GNA15P30679 374 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 CNR2P34972 360 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 TIE1P35590 1138 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 MRPS21P82921 87 aaKnown RBP19.25■□□□□ 0.67
HOXD11-202ENST00000498438 SIM2Q14190 667 aaPredicted RBP19.25■□□□□ 0.67
HOXD11-202ENST00000498438 CT47A1Q5JQC4 288 aaPredicted RBP19.25■□□□□ 0.67
HOXD11-202ENST00000498438 MIIPQ5JXC2 388 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 DENND1BQ6P3S1 775 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 FMNL3Q8IVF7 1028 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 CCDC33Q8N5R6 958 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 ALLCQ8N6M5 410 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 CLEC4CQ8WTT0 213 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 RNF139Q8WU17 664 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 BHMTQ93088 406 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 PLD4Q96BZ4 506 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 HSFY1Q96LI6 401 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 TUBGCP2Q9BSJ2 902 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 DCLK3Q9C098 648 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 NDST4Q9H3R1 872 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 SIX2Q9NPC8 291 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 ABCC13Q9NSE7 274 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 SAMSN1Q9NSI8 373 aaKnown RBP19.25■□□□□ 0.67
HOXD11-202ENST00000498438 DNAJC17Q9NVM6 304 aaKnown RBP19.25■□□□□ 0.67
HOXD11-202ENST00000498438 WDR35Q9P2L0 1181 aa19.25■□□□□ 0.67
HOXD11-202ENST00000498438 MMP17Q9ULZ9 603 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms