RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 LSM7Q9UK45 103 aaKnown RBP15.19■□□□□ 0.02
PDAP1-204ENST00000496335 GTPBP10A4D1E9 387 aaKnown RBP15.18■□□□□ 0.02
PDAP1-204ENST00000496335 YJEFN3A6XGL0 299 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 BECN2A8MW95 431 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 E7ENQ6 273 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 ATG13O75143 517 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 KLKB1P03952 638 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
PDAP1-204ENST00000496335 GAD2Q05329 585 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 KDSRQ06136 332 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 STILQ15468 1287 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 C2orf27AQ580R0 203 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 MIIPQ5JXC2 388 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 BSPRYQ5W0U4 402 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 BTBD8Q5XKL5 378 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 Q6ZNB5 142 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 RBM43Q6ZSC3 357 aaKnown RBP15.18■□□□□ 0.02
PDAP1-204ENST00000496335 TPGS1Q6ZTW0 290 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 EDEM1Q92611 657 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 CDK5RAP1Q96SZ6 601 aaKnown RBP15.18■□□□□ 0.02
PDAP1-204ENST00000496335 PNKPQ96T60 521 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 NDST4Q9H3R1 872 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 SIX2Q9NPC8 291 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 MARCH2Q9P0N8 246 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 APEX2Q9UBZ4 518 aa15.18■□□□□ 0.02
PDAP1-204ENST00000496335 AJAP1Q9UKB5 411 aaPredicted RBP15.18■□□□□ 0.02
PDAP1-204ENST00000496335 SPTBN4Q9H254 2564 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 SLC12A8A0AV02 714 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 KCNJ18B7U540 433 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 TRIM24O15164 1050 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 HOXC11O43248 304 aaPredicted RBP15.17■□□□□ 0.02
PDAP1-204ENST00000496335 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
PDAP1-204ENST00000496335 KAT7O95251 611 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 USP8P40818 1118 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
PDAP1-204ENST00000496335 DAOAP59103 153 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 COG7P83436 770 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 SRSF5Q13243 272 aaKnown RBP15.17■□□□□ 0.02
PDAP1-204ENST00000496335 KCNJ12Q14500 433 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 VWA3BQ502W6 1294 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 DENND1BQ6P3S1 775 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 ENOSF1Q7L5Y1 443 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 ETFBKMTQ8IXQ9 262 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 USP33Q8TEY7 942 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 CLEC4CQ8WTT0 213 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 CNGB3Q9NQW8 809 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 ARHGEF4Q9NR80 690 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 SLC8A2Q9UPR5 921 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 NFE2L3Q9Y4A8 694 aa15.17■□□□□ 0.02
PDAP1-204ENST00000496335 EML5Q05BV3 1969 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 SPAG17Q6Q759 2223 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 NEDD8-MDP1E9PL57 170 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 PES1O00541 588 aaKnown RBP15.16■□□□□ 0.02
PDAP1-204ENST00000496335 THAP12O43422 761 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 HRO43593 1189 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 TULP3O75386 442 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 APODP05090 189 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 GPD2P43304 727 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 CT47A1Q5JQC4 288 aaPredicted RBP15.16■□□□□ 0.02
PDAP1-204ENST00000496335 EMC10Q5UCC4 262 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 DPY19L2P1Q6NXN4 242 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 C11orf57Q6ZUT1 292 aaPredicted RBP15.16■□□□□ 0.02
PDAP1-204ENST00000496335 LONP2Q86WA8 852 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 SCML4Q8N228 414 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 PHTF2Q8N3S3 785 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 DCLK2Q8N568 766 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 CCDC33Q8N5R6 958 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 RNF139Q8WU17 664 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 ZNF606Q8WXB4 792 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 SHC3Q92529 594 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 BHMTQ93088 406 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 P2RY11Q96G91 374 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 HSFY1Q96LI6 401 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 HHIPQ96QV1 700 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 BBS2Q9BXC9 721 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 MIS12Q9H081 205 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 EPC1Q9H2F5 836 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 ZDHHC4Q9NPG8 344 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 ST7Q9NRC1 585 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 SFMBT1Q9UHJ3 866 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 DNAJC12Q9UKB3 198 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 STRIP2Q9ULQ0 834 aa15.16■□□□□ 0.02
PDAP1-204ENST00000496335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
PDAP1-204ENST00000496335 PNMA6AP0CW24 399 aaPredicted RBP15.15■□□□□ 0.02
PDAP1-204ENST00000496335 TYRP14679 529 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 GNA15P30679 374 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
PDAP1-204ENST00000496335 HOXA6P31267 233 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 TIE1P35590 1138 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 GRIA2P42262 883 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 KCNMA1Q12791 1236 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 DMC1Q14565 340 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 LPAL2Q16609 132 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 TCP11X2Q5H9J9 407 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 SYT13Q7L8C5 426 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 DENND1CQ8IV53 801 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 FMNL3Q8IVF7 1028 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 ENOX1Q8TC92 643 aaKnown RBP15.15■□□□□ 0.02
PDAP1-204ENST00000496335 FAM81BQ96LP2 452 aa15.15■□□□□ 0.02
PDAP1-204ENST00000496335 ABCC13Q9NSE7 274 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms