RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 DNAI2Q9GZS0 605 aa10.16□□□□□ -0.78
UBR4-216ENST00000494503 CD93Q9NPY3 652 aa10.16□□□□□ -0.78
UBR4-216ENST00000494503 WDR35Q9P2L0 1181 aa10.16□□□□□ -0.78
UBR4-216ENST00000494503 RASAL2Q9UJF2 1139 aa10.16□□□□□ -0.78
UBR4-216ENST00000494503 KLK13Q9UKR3 277 aa10.16□□□□□ -0.78
UBR4-216ENST00000494503 MORC2Q9Y6X9 1032 aaPredicted RBP10.16□□□□□ -0.78
UBR4-216ENST00000494503 PKD1L2Q7Z442 2459 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 A0A0A0MRY4 1105 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 PVALEFA0A1B0GWK0 134 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 A0A1W2PQH9 124 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 SYNCRIPO60506 623 aaKnown RBP10.15□□□□□ -0.78
UBR4-216ENST00000494503 VNN1O95497 513 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 NR3C1P04150 777 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 RARGP13631 454 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 MAOBP27338 520 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 HOXD12P35452 270 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 BMT2Q1RMZ1 405 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 ZNF394Q53GI3 561 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
UBR4-216ENST00000494503 GPRIN1Q7Z2K8 1008 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 TADA2BQ86TJ2 420 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 C12orf56Q8IXR9 622 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 CHCHD4Q8N4Q1 142 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 ZMIZ2Q8NF64 920 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 SNX19Q92543 992 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
UBR4-216ENST00000494503 GZF1Q9H116 711 aaPredicted RBP10.15□□□□□ -0.78
UBR4-216ENST00000494503 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 SERTAD1Q9UHV2 236 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 DNMT3LQ9UJW3 386 aa10.15□□□□□ -0.78
UBR4-216ENST00000494503 A0A1W2PQF6 199 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 SRRM3A6NNA2 597 aaPredicted RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 WASH3PC4AMC7 463 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 PRRT4C9JH25 899 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 CALUO43852 315 aaPredicted RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 CACNG3O60359 315 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 HLA-DRAP01903 254 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 C4BPAP04003 597 aaKnown RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 RPN1P04843 607 aaKnown RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 RALAP11233 206 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 ACADMP11310 421 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 KRT13P13646 458 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 ASPAP45381 313 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 EFEMP1Q12805 493 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 STK4Q13043 487 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 SEMA3BQ13214 749 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 WDR45BQ5MNZ6 344 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 CNNM4Q6P4Q7 775 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 CLEC20AQ6ZU45 233 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 HTR3DQ70Z44 454 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 SLC41A1Q8IVJ1 513 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 HSCBQ8IWL3 235 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 ZCCHC9Q8N567 271 aaKnown RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 KDF1Q8NAX2 398 aaPredicted RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 KIAA0895Q8NCT3 520 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 SETD7Q8WTS6 366 aaKnown RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 UCMAQ8WVF2 138 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 GATA6Q92908 595 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 FOXJ1Q92949 421 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 CCDC47Q96A33 483 aaKnown RBP10.14□□□□□ -0.79
UBR4-216ENST00000494503 CYFIP2Q96F07 1278 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 MRGPRX1Q96LB2 322 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 CAMK1GQ96NX5 476 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 NT5C1AQ9BXI3 368 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 CIPCQ9C0C6 399 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 OSER1Q9NX31 292 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 SUSD2Q9UGT4 822 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 PCDHA7Q9UN72 937 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 SCML2Q9UQR0 700 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 NEUROG3Q9Y4Z2 214 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 PCDHA5Q9Y5H7 936 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 PCDH15Q96QU1 1955 aa10.14□□□□□ -0.79
UBR4-216ENST00000494503 A0A1W2PQD8 194 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 H0Y626 953 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 SH3BP5O60239 455 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 TRIM16O95361 564 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 F13A1P00488 732 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 CYBBP04839 570 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 ZDHHC11BP0C7U3 371 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 TRIM49P0CI25 452 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 TRIM49CP0CI26 452 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 CHRM1P11229 460 aaPredicted RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 PDIA4P13667 645 aaKnown RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 CD6P30203 668 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 CORO1AP31146 461 aaKnown RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 PLA2G4AP47712 749 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 GCLMP48507 274 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 VAMP7P51809 220 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 FAM193AP78312 1265 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 EHHADHQ08426 723 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 COL9A2Q14055 689 aaPredicted RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 ZACNQ401N2 412 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 RESP18Q5W5W9 173 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 SV2AQ7L0J3 742 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 FAM124AQ86V42 546 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms