RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PIP4K2AP48426 406 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 POLGP54098 1239 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 UCP3P55916 312 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 WNT3AP56704 352 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 PRAMEP78395 509 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 MRPS5P82675 430 aaKnown RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 GRM4Q14833 912 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 ATXN7L2Q5T6C5 722 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 OTOAQ7RTW8 1153 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 LINC00346Q8IVM7 164 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 DMRTC2Q8IXT2 367 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 MFSD4AQ8N468 514 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 DTWD1Q8N5C7 304 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 OR52K2Q8NGK3 314 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 PDLIM5Q96HC4 596 aaKnown RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 CMTM3Q96MX0 182 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 LENG8Q96PV6 779 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 YIPF2Q9BWQ6 316 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 CPEB1Q9BZB8 566 aaKnown RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 MS4A7Q9GZW8 240 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 SEMA6CQ9H3T2 930 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 UNKLQ9H9P5 680 aaKnown RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 LTB4R2Q9NPC1 389 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 LANCL2Q9NS86 450 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 BEX4Q9NWD9 120 aaPredicted RBP7.2□□□□□ -1.26
SNX13-210ENST00000494402 KCND2Q9NZV8 630 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 NFU1Q9UMS0 254 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 SUFUQ9UMX1 484 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 PLEKHM1Q9Y4G2 1056 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 PCDHB4Q9Y5E5 795 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 CAPN6Q9Y6Q1 641 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 PNMA6EA0A0J9YXQ4 647 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 CLRN2A0PK11 232 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 J3KTA2 159 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 M0R082 166 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 UBXN8O00124 270 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 CACNB4O00305 520 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 SCAMP1O15126 338 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 TGFB1I1O43294 461 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 CCP110O43303 1012 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 RIPK2O43353 540 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 CCNT2O60583 730 aaKnown RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 PRAMEF4O60810 478 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 HNRNPCL1O60812 293 aaKnown RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 UNC5CO95185 931 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 GNAI2P04899 355 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 EIF2S1P05198 315 aaKnown RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 GRPP07492 148 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 LTA4HP09960 611 aaKnown RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 MATR3P43243 847 aaKnown RBP eCLIP7.19□□□□□ -1.26
SNX13-210ENST00000494402 SLC6A11P48066 632 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 SULT1E1P49888 294 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 LIG4P49917 911 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 MRPL12P52815 198 aaKnown RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 ARFIP1P53367 373 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 DBPQ10586 325 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 NFATC3Q12968 1075 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ATP1A4Q13733 1029 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 SHROOM1Q2M3G4 852 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 DCAF17Q5H9S7 520 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 ANKRD34AQ69YU3 496 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 CRELD2Q6UXH1 353 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 CHST9Q7L1S5 443 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 BMP8AQ7Z5Y6 402 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 RABEPKQ7Z6M1 372 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 TMEM52Q8NDY8 209 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ZNF417Q8TAU3 575 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 HMGB4Q8WW32 186 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 IRF7Q92985 503 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 PERPQ96FX8 193 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ZNF587Q96SQ5 575 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 PIP5K1AQ99755 562 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 TCHPQ9BT92 498 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 TUBB6Q9BUF5 446 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 HTATIP2Q9BUP3 242 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 COL25A1Q9BXS0 654 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 REXO4Q9GZR2 422 aaKnown RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 SH2D4AQ9H788 454 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 BCO1Q9HAY6 547 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 PCDHB16Q9NRJ7 776 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ZBTB40Q9NUA8 1239 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 TMEM140Q9NV12 185 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ANO10Q9NW15 660 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 HECAQ9UBI9 543 aaPredicted RBP7.19□□□□□ -1.26
SNX13-210ENST00000494402 IL19Q9UHD0 177 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 SLCO3A1Q9UIG8 710 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 GGA1Q9UJY5 639 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ACSL6Q9UKU0 697 aa7.19□□□□□ -1.26
SNX13-210ENST00000494402 ARHGEF37A1IGU5 675 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 AQP7P3A6NL99 342 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 CCDC169A6NNP5 214 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 AP3B1O00203 1094 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 GCNT3O95395 438 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 KRT4P19013 534 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 TYMPP19971 482 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 PTGS1P23219 599 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 PRKCHP24723 683 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 MCM3P25205 808 aa7.18□□□□□ -1.26
SNX13-210ENST00000494402 BMPR1AP36894 532 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms