RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SMOC2Q9H3U7 446 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 ATP6V0A4Q9HBG4 840 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 RIC8AQ9NPQ8 531 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF302Q9NR11 478 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 DLL4Q9NR61 685 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 PUF60Q9UHX1 559 aaKnown RBP5.8□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF180Q9UJW8 692 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 KCTD3Q9Y597 815 aa5.8□□□□□ -1.48
PTCD3-219ENST00000494323 NFASCO94856 1347 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CFAP54Q96N23 3096 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 USP34Q70CQ2 3546 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 IGKV6D-21A0A0A0MT36 114 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 NT5C1B-RDH14C9J2C7 533 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FAM86B1E9PN63 330 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ADAMTS3O15072 1205 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA12O60330 932 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 H2AFYO75367 372 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 GPR32O75388 356 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CSDE1O75534 798 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 RPLP2P05387 115 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FAM86B2P0C5J1 330 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CALM1P0DP23 149 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CALM2P0DP24 149 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CALM3P0DP25 149 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ATF7P17544 494 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CA8P35219 290 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 GNALP38405 381 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 LIFRP42702 1097 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CRYBB1P53674 252 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 NLRP11P59045 1033 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 IRX6P78412 446 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PFKPQ01813 784 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 KRT17Q04695 432 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 UBE3AQ05086 875 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 KCNC3Q14003 757 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 LONRF3Q496Y0 759 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF484Q5JVG2 852 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FAM160B1Q5W0V3 765 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 EFCAB12Q6NXP0 572 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 MIS18BP1Q6P0N0 1132 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 TMC5Q6UXY8 1006 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 LIPIQ6XZB0 460 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 TMEM184AQ6ZMB5 413 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 SYNE3Q6ZMZ3 975 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FRMD7Q6ZUT3 714 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 TMTC3Q6ZXV5 915 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 C14orf80Q86SX3 495 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FAM228AQ86W67 206 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 MICU3Q86XE3 530 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PLA2G4DQ86XP0 818 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PHYKPLQ8IUZ5 450 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CCDC60Q8IWA6 550 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 MYO1HQ8N1T3 1032 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 C12orf76Q8N812 135 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 DTX3Q8N9I9 347 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 TTC8Q8TAM2 541 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FEZF2Q8TBJ5 459 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CALML6Q8TD86 181 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 JPH3Q8WXH2 748 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 MRPS27Q92552 414 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FOXRED1Q96CU9 486 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CASD1Q96PB1 797 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 CDCA3Q99618 268 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PRRX2Q99811 253 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 FOXB1Q99853 325 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ANO3Q9BYT9 981 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ZDHHC5Q9C0B5 715 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 LSG1Q9H089 658 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 ENTPD7Q9NQZ7 604 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 C1orf112Q9NSG2 853 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 TMEM161AQ9NX61 479 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA9Q9Y5G4 932 aaKnown RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA8Q9Y5G5 932 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA7Q9Y5G6 932 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA6Q9Y5G7 932 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA3Q9Y5H0 932 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 PCDHGA2Q9Y5H1 932 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 IRAK3Q9Y616 596 aa5.79□□□□□ -1.48
PTCD3-219ENST00000494323 EP300Q09472 2414 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-219ENST00000494323 UBA6A0AVT1 1052 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 C2CD4DB7Z1M9 353 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 IPO5O00410 1097 aaKnown RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 KDM1AO60341 852 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 C22orf31O95567 290 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 CXCL14O95715 111 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 FOSP01100 380 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ZSCAN20P17040 1043 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-219ENST00000494323 LAG3P18627 525 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 FGFR4P22455 802 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 GPR3P46089 330 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 SLC26A2P50443 739 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 CLCN3P51790 818 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ADCY7P51828 1080 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ITGA1P56199 1179 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ROM1Q03395 351 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 ODF1Q14990 250 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 NECTIN1Q15223 517 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 SKIDA1Q1XH10 827 aa5.78□□□□□ -1.48
PTCD3-219ENST00000494323 TTC38Q5R3I4 469 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms