RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 KCTD13Q8WZ19 329 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 SUSD3Q96L08 255 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 ZFP42Q96MM3 310 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 RRN3Q9NYV6 651 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 PCDHB8Q9UN66 801 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 EFR3BQ9Y2G0 817 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 SLC4A7Q9Y6M7 1214 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 SCN1AP35498 2009 aa7□□□□□ -1.29
FNDC3B-212ENST00000494000 B9A039 149 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PPEF2O14830 753 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SYN3O14994 580 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 ZNF185O15231 689 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 RNF8O76064 485 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PFKMP08237 780 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 TNFRSF8P28908 595 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PTPN7P35236 360 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SKIV2L2P42285 1042 aaKnown RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 GJA8P48165 433 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 POLD2P49005 469 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 CLCNKBP51801 687 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 C1QTNF8P60827 252 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 DSC1Q08554 894 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SMARCB1Q12824 385 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PTPN20Q4JDL3 420 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 HSP90B2PQ58FF3 399 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 ODF2Q5BJF6 829 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 EFHC1Q5JVL4 640 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 C8orf74Q6P047 294 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 VSIG1Q86XK7 387 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 DRAXINQ8NBI3 349 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 ATP6V1E2Q96A05 226 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 COLEC11Q9BWP8 271 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 DUSP16Q9BY84 665 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 FRMD8P1Q9BZ68 369 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 FAM129AQ9BZQ8 928 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 HIPK3Q9H422 1215 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 ZNF304Q9HCX3 659 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PNPLA8Q9NP80 782 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 MIOSQ9NXC5 875 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 KRIT1O00522 736 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 NDC80O14777 642 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SPTLC1O15269 473 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 ATMINO43313 823 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 AHCYL1O43865 530 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 CFHP08603 1231 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 H2AFXP16104 143 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 ZNF24P17028 368 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 COL9A1P20849 921 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 CHRNA3P32297 505 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 PCK1P35558 622 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SLC6A3Q01959 620 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 DHX34Q14147 1143 aaKnown RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 MBTPS1Q14703 1052 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 MTFR1Q15390 333 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 LONRF2Q1L5Z9 754 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SCARA3Q6AZY7 606 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 HIBCHQ6NVY1 386 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 CNKSR3Q6P9H4 555 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 C10orf67Q8IYJ2 551 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SCML4Q8N228 414 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 LPPQ93052 612 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 SYT15Q9BQS2 421 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 C2orf49Q9BVC5 232 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 DDX43Q9NXZ2 648 aaKnown RBP6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 HMGXB4Q9UGU5 601 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 RASAL2Q9UJF2 1139 aa6.99□□□□□ -1.29
FNDC3B-212ENST00000494000 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 B3GAT3O94766 335 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 GPD1P21695 349 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 MZF1P28698 734 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 CXCR5P32302 372 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 CASP2P42575 452 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 ZNF143P52747 638 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 RNASELQ05823 741 aaKnown RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 WSCD1Q658N2 575 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 OR6B2Q6IFH4 312 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 TMCO3Q6UWJ1 677 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 C4orf50Q6ZRC1 276 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 SYDE1Q6ZW31 735 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 TBC1D1Q86TI0 1168 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 RTN4RL1Q86UN2 441 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 DNAAF5Q86Y56 855 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 IFT20Q8IY31 132 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 DCP1BQ8IZD4 617 aaKnown RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 IPMKQ8NFU5 416 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 MYCBPAPQ8TBZ2 947 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 MCEEQ96PE7 176 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 CPXM1Q96SM3 734 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 CNPY3Q9BT09 278 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 CXCL16Q9H2A7 254 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 GOLGA2P5Q9HBQ8 144 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 ARFGAP3Q9NP61 516 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 STK39Q9UEW8 545 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 PACSIN2Q9UNF0 486 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 ZNF487B1APH4 448 aa6.98□□□□□ -1.29
FNDC3B-212ENST00000494000 MYO1CO00159 1063 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms