RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 PCGF5Q86SE9 256 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 ACDQ96AP0 544 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 SERPINI1Q99574 410 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 PKP2Q99959 881 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 EBF4Q9BQW3 602 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 RMND5AQ9H871 391 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 CAAP1Q9H8G2 361 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 CXorf21Q9HAI6 301 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 SACM1LQ9NTJ5 587 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 THG1LQ9NWX6 298 aaKnown RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 HOXC10Q9NYD6 342 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 DAPK2Q9UIK4 370 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 FBXO9Q9UK97 447 aaPredicted RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 ARHGAP26Q9UNA1 814 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 DRG1Q9Y295 367 aaKnown RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 PLLPQ9Y342 182 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 TNRC6CQ9HCJ0 1690 aaKnown RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 A0A1W2PPW3 197 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 C7orf72A4D263 438 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 J3QRK9 145 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 GIPC1O14908 333 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 AREL1O15033 823 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 LIASO43766 372 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 TDP2O95551 362 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 RALAP11233 206 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 AP3M2P53677 418 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 TMPRSS15P98073 1019 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 CBWD6Q4V339 395 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 FGD3Q5JSP0 725 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 CBWD3Q5JTY5 395 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 CBWD5Q5RIA9 395 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 GRIN3AQ8TCU5 1115 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 HAS1Q92839 578 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 FBXL8Q96CD0 374 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 ZNF347Q96SE7 839 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 KLF6Q99612 283 aaPredicted RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 TUBA1CQ9BQE3 449 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 TMA7Q9Y2S6 64 aaKnown RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 MEGF6O75095 1541 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 TSPY2A6NKD2 308 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 USP17L12C9JPN9 530 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 USP17L21D6R901 530 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 TMX2-CTNND1H3BSU7 103 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 MSI1O43347 362 aaKnown RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 PSTPIP1O43586 416 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 JRKO75564 520 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 ADAMTS2O95450 1211 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 TGM1P22735 817 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 BTDP43251 543 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 ADAM17P78536 824 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 BNIP3Q12983 259 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 MGAT5BQ3V5L5 792 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 CAPN12Q6ZSI9 719 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 RFPL4BQ6ZWI9 263 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 GSTA5Q7RTV2 222 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 GALNT13Q8IUC8 556 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 COLGALT2Q8IYK4 626 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 TNIP2Q8NFZ5 429 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 SLC44A1Q8WWI5 657 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 SLC39A3Q9BRY0 314 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 COPS7BQ9H9Q2 264 aaPredicted RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 THAP1Q9NVV9 213 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 DNAJC28Q9NX36 388 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 IVNS1ABPQ9Y6Y0 642 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 ZNF335Q9H4Z2 1342 aaPredicted RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 GOLGA8MH3BSY2 632 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 EIF3DO15371 548 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS8-225ENST00000492449 TGFB1I1O43294 461 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 MYO1DO94832 1006 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 POLR2BP30876 1174 aaKnown RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 MYL7Q01449 175 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 TFAP4Q01664 338 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 HSPA14Q0VDF9 509 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 NFATC3Q12968 1075 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 HIF1AQ16665 826 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 ARHGAP44Q17R89 818 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 CAVIN4Q5BKX8 364 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 PLEKHA7Q6IQ23 1121 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 GADL1Q6ZQY3 521 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 LINC00299Q6ZSB3 139 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 FRMD7Q6ZUT3 714 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 DCP2Q8IU60 420 aaKnown RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 CPNE9Q8IYJ1 553 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 KATNAL2Q8IYT4 538 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 EPS8L1Q8TE68 723 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 FBXL18Q96ME1 805 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 YME1L1Q96TA2 773 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 VRTNQ9H8Y1 702 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 ARMC1Q9NVT9 282 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 DNMT3BQ9UBC3 853 aaKnown RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
VPS8-225ENST00000492449 APOBEC2Q9Y235 224 aaKnown RBP10.01□□□□□ -0.81
VPS8-225ENST00000492449 FER1L6Q2WGJ9 1857 aa10□□□□□ -0.81
VPS8-225ENST00000492449 ILVBLA1L0T0 632 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms