RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 IRF1P10914 325 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 CCDC130P13994 396 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 PRKCSHP14314 528 aaPredicted RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 TNNI1P19237 187 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 NDUFV2P19404 249 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 YWHAQP27348 245 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 GNL1P36915 607 aaPredicted RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 WASP42768 502 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 PPP3CCP48454 512 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 TUBP50607 506 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 CDH8P55286 799 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 TNNC1P63316 161 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 STK4Q13043 487 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 SEMA3BQ13214 749 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 SURF1Q15526 300 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 HSF5Q4G112 596 aaPredicted RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 EOGTQ5NDL2 527 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 C10orf76Q5T2E6 689 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 SNX30Q5VWJ9 437 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 SLC23A3Q6PIS1 610 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 TOGARAM2Q6ZUX3 1019 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 LPCAT2Q7L5N7 544 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 DDX42Q86XP3 938 aaKnown RBP eCLIP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 NUP93Q8N1F7 819 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 DEFB119Q8N690 84 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 ZNF513Q8N8E2 541 aaPredicted RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 XXYLT1Q8NBI6 393 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 CCDC26Q8TAB7 109 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 ZCCHC14Q8WYQ9 949 aaKnown RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 OVCA2Q8WZ82 227 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 SLITRK1Q96PX8 696 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 SMOQ99835 787 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 VRTNQ9H8Y1 702 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 KIAA1586Q9HCI6 787 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 DMAP1Q9NPF5 467 aaPredicted RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 OSER1Q9NX31 292 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 NXF1Q9UBU9 619 aaKnown RBP8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 TRAF3IP3Q9Y228 551 aa8.93□□□□□ -0.98
PCOLCE-209ENST00000490909 PLXNA2O75051 1894 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 BICDL2A1A5D9 508 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 PRRT4C9JH25 899 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 CYP26A1O43174 497 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 CACNG3O60359 315 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 GJB3O75712 270 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 ALDH1A2O94788 518 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 FGFR1OPO95684 399 aaKnown RBP8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 TBX18O95935 607 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 CAPNS1P04632 268 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 CFIP05156 583 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 HOXB2P14652 356 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 RPL13P26373 211 aaKnown RBP8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 ERCC5P28715 1186 aaPredicted RBP8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 ASPAP45381 313 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 DLG4P78352 724 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 GAD2Q05329 585 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 LRRC63Q05C16 580 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 LMAN2Q12907 356 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 ZNF699Q32M78 642 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 EDRF1Q3B7T1 1238 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 CAVIN1Q6NZI2 390 aaKnown RBP8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 SLC9A9Q8IVB4 645 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 KIAA0895Q8NCT3 520 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 PDZD8Q8NEN9 1154 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 OTUB2Q96DC9 234 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 TWNKQ96RR1 684 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 TSG101Q99816 390 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 POLMQ9NP87 494 aaPredicted RBP8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 SPHK2Q9NRA0 654 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 FAM49BQ9NUQ9 324 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 EHD2Q9NZN4 543 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 TMEM63CQ9P1W3 806 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 TBC1D14Q9P2M4 693 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 CHORDC1Q9UHD1 332 aaPredicted RBP8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 NEUROG3Q9Y4Z2 214 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 RAD54BQ9Y620 910 aa8.92□□□□□ -0.98
PCOLCE-209ENST00000490909 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 CABIN1Q9Y6J0 2220 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 TMEM8BA6NDV4 472 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 UPK3BL1B0FP48 263 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 HHLA1C9JL84 531 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 UPK3BL2E5RIL1 263 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 NEDD8-MDP1E9PL57 170 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 MDM4O15151 490 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 MAPK13O15264 365 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 KALRNO60229 2985 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 TLR5O60602 858 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 AP1G2O75843 785 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 RTN3O95197 1032 aaPredicted RBP8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 CD59P13987 128 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 HOXD12P35452 270 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 PRCPP42785 496 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 TNFRSF4P43489 277 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 CLDN10P78369 228 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 SIM1P81133 766 aaPredicted RBP8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 RPL6Q02878 288 aaKnown RBP8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 ENPEPQ07075 957 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 NCOA4Q13772 614 aa8.91□□□□□ -0.98
PCOLCE-209ENST00000490909 COL9A2Q14055 689 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms