RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 EXD3Q8N9H8 876 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 CADM4Q8NFZ8 388 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 ERLEC1Q96DZ1 483 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 NAF1Q96HR8 494 aaKnown RBP7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 ZBTB45Q96K62 511 aaPredicted RBP7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 AIFM3Q96NN9 605 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 GPR174Q9BXC1 333 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 MIR1-1HGQ9H1L0 117 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 TTC12Q9H892 705 aaPredicted RBP7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 FTSJ1Q9UET6 329 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 NAP1L2Q9ULW6 460 aaPredicted RBP7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 UBQLN1Q9UMX0 589 aaKnown RBP7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 SNX11Q9Y5W9 270 aa7.65□□□□□ -1.18
PDLIM1-203ENST00000490391 TBC1D3BA6NDS4 549 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 METTL12A8MUP2 240 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 KCNJ18B7U540 433 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 H0Y8X5 98 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 KCNK3O14649 394 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 ENC1O14682 589 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 TRIM24O15164 1050 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 DYRK3O43781 588 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 AFPP02771 609 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 EPXP11678 715 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 ADH5P11766 374 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 CDK4P11802 303 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 HARSP12081 509 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 HDCP19113 662 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 CCT8P50990 548 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 PCBP4P57723 403 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 NFKB2Q00653 900 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 VAC14Q08AM6 782 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 KCNB1Q14721 858 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 DDR2Q16832 855 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 TSGA10IPQ3SY00 556 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 C4orf17Q53FE4 359 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 EARS2Q5JPH6 523 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 DCAF12L1Q5VU92 463 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 KIAA1614Q5VZ46 1190 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 EGFLAMQ63HQ2 1017 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 CATSPER3Q86XQ3 398 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 CACTIN-AS1Q8N1I8 211 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 DCBLD1Q8N8Z6 715 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 TERB1Q8NA31 727 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 RFFLQ8WZ73 363 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 BRF1Q92994 677 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 IGSF8Q969P0 613 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 MRPL4Q9BYD3 311 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 FAM117AQ9C073 453 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 RWDD1Q9H446 243 aaPredicted RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 NCOA5Q9HCD5 579 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 STARD5Q9NSY2 213 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 USP36Q9P275 1121 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 ARHGAP28Q9P2N2 729 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 UXTQ9UBK9 157 aaPredicted RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 EIF2B4Q9UI10 523 aaKnown RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 PCDHA12Q9UN75 941 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 SRPK3Q9UPE1 567 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 HEMK1Q9Y5R4 338 aaPredicted RBP7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 RAD54BQ9Y620 910 aa7.64□□□□□ -1.19
PDLIM1-203ENST00000490391 TCHHQ07283 1943 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 E2F8A0AVK6 867 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 SUV39H1O43463 412 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 TRAK2O60296 914 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 TULP3O75386 442 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 MED24O75448 989 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 OLFM2O95897 454 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 NFICP08651 508 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 BMP4P12644 408 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 CPA1P15085 419 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 NPTX2P47972 431 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 AFF3P51826 1226 aaKnown RBP7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 SLC7A9P82251 487 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 NOLC1Q14978 699 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 KCNT1Q5JUK3 1230 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 LY6G5CQ5SRR4 150 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 C10orf76Q5T2E6 689 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 LCE1DQ5T752 114 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 BROXQ5VW32 411 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 ATG14Q6ZNE5 492 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 PARP9Q8IXQ6 854 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 ENGASEQ8NFI3 743 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 IFT74Q96LB3 600 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 AGXT2Q9BYV1 514 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 HAPLN2Q9GZV7 340 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 MKRN2Q9H000 416 aaKnown RBP7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 PLEKHA5Q9HAU0 1116 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 ITM2CQ9NQX7 267 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 KCNJ14Q9UNX9 436 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 MAN2B2Q9Y2E5 1009 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 PCDHB5Q9Y5E4 795 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 HIVEP1P15822 2718 aa7.63□□□□□ -1.19
PDLIM1-203ENST00000490391 CKAP5Q14008 2032 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ANO9A1A5B4 782 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 K7ENP7 123 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 PIRO00625 290 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 SLC9A3R1O14745 358 aaPredicted RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 HOXC11O43248 304 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms